RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TGOLN2O43493 480 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 GPR137BO60478 399 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 TRGC2P03986 189 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 LIFP15018 202 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF20P17024 532 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 IL2RGP31785 369 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 RSPO1Q2MKA7 263 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-207ENST00000553837 GGNBP1Q5YKI7 109 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 COMMD2Q86X83 199 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 LIN37Q96GY3 246 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-207ENST00000553837 LYZL4Q96KX0 146 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 LPAR5Q9H1C0 372 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 SMOC1Q9H4F8 434 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 A0A0G2JMM0 328 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 A0A1W2PPB8 328 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 A0A1W2PRS3 328 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 KIR3DP1A8MWS1 328 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 KNG1P01042 644 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 CYC1P08574 325 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 SERPINA2P20848 420 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 ENDOGQ14249 297 aaKnown RBP10.64□□□□□ -0.71
SHMT2-207ENST00000553837 PLAC9Q5JTB6 97 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 RIPPLY2Q5TAB7 128 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF343Q6P1L6 599 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 GLIPR1L1Q6UWM5 242 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 SGPP2Q8IWX5 399 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF283Q8N7M2 679 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 AGBL5Q8NDL9 886 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 KCNG3Q8TAE7 436 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF837Q96EG3 531 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-207ENST00000553837 JSRP1Q96MG2 331 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-207ENST00000553837 RARRES2Q99969 163 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 ATG101Q9BSB4 218 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 OR51B6Q9H340 312 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 BANF2Q9H503 90 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF160Q9HCG1 818 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 NXT1Q9UKK6 140 aaKnown RBP10.64□□□□□ -0.71
SHMT2-207ENST00000553837 CNTRLQ7Z7A1 2325 aa10.64□□□□□ -0.71
SHMT2-207ENST00000553837 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 C19orf67A6NJJ6 358 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 DVL1O14640 695 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SOCS1O15524 211 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 C1QL1O75973 258 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TRGC1P0CF51 173 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 CCL1P22362 96 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 GLIPR1P48060 266 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TDGF1P3P51864 188 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 ERVFRD-1P60508 538 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 DLK1P80370 383 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 ARFRP1Q13795 201 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 RAET1LQ5VY80 246 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 ZIC4Q8N9L1 334 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 FAM213BQ8TBF2 198 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SSC4DQ8WTU2 575 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 NABP1Q96AH0 204 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TVP23CQ96ET8 276 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 ST6GALNAC5Q9BVH7 336 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 MOB1AQ9H8S9 216 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 WFDC1Q9HC57 220 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TCFL5Q9UL49 500 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 URGCP-MRPS24S4R325 110 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 A0A0J9YW62 118 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 LNP1A1A4G5 178 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SDCBPO00560 298 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 HSD17B6O14756 317 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 PHOX2AO14813 284 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 RAD51DO75771 328 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 MPIG6BO95866 241 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SCGB1D2O95969 90 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 PPP1CCP36873 323 aaKnown RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 ECI1P42126 302 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM50BP56557 158 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 RPS18P62269 152 aaKnown RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 CSNK2A1P68400 391 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 JOSD1Q15040 202 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 PEAR1Q5VY43 1037 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 C1QL2Q7Z5L3 287 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 ZNF429Q86V71 674 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM123Q8N131 208 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM156Q8N614 296 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 CSNK2A3Q8NEV1 391 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SLC24A4Q8NFF2 622 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SEMA6DQ8NFY4 1073 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 OR2Y1Q8NGV0 311 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 OR14K1Q8NGZ2 314 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 HPSE2Q8WWQ2 592 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 C22orf15Q8WYQ4 148 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 TMEM54Q969K7 222 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SRXN1Q9BYN0 137 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 SLC25A31Q9H0C2 315 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 EHFQ9NZC4 300 aa10.63□□□□□ -0.71
SHMT2-207ENST00000553837 MRPS28Q9Y2Q9 187 aaKnown RBP10.63□□□□□ -0.71
SHMT2-207ENST00000553837 PCSK5Q92824 1860 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 NCKAP5O14513 1909 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 A0A087WZY1 265 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 A8MXE2 369 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 C9J4A7 227 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 NTF4P34130 210 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 PTGER4P35408 488 aa10.62□□□□□ -0.71
SHMT2-207ENST00000553837 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms