RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TMEM27Q9HBJ8 222 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PRSS16Q9NQE7 514 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 DDX19AQ9NUU7 478 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 SLC17A7Q9P2U7 560 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CD300AQ9UGN4 299 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 AHCTF1Q8WYP5 2266 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 KNTC1P50748 2209 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 MYO18AQ92614 2054 aaKnown RBP2.03□□□□□ -2.08
SCFD1-210ENST00000553693 CELSR1Q9NYQ6 3014 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 ANAPC1Q9H1A4 1944 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 NBPF19A0A087WUL8 3843 aa2.03□□□□□ -2.08
SCFD1-210ENST00000553693 PDZD2O15018 2839 aa2.03□□□□□ -2.09
SCFD1-210ENST00000553693 KNL1Q8NG31 2342 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 ADGRG4Q8IZF6 3080 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 SCN1AP35498 2009 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 PTPRJQ12913 1337 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 TRAV8-7A0A075B6U6 113 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 C11orf94C9JXX5 98 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 F8VP50 259 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 H0YHG0 523 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 H7C1H1 209 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 GATCO43716 136 aaKnown RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CTDNEP1O95476 244 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 BGNP21810 368 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CD9P21926 228 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 OMGP23515 440 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 SSTR5P35346 364 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 XIAPP98170 497 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 IFITM3Q01628 133 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 KRTAP21-3Q3LHN1 58 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 RAB43Q86YS6 212 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CBLN2Q8IUK8 224 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CD302Q8IX05 232 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 ARRDC1Q8N5I2 433 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 DRAXINQ8NBI3 349 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 OR10G2Q8NGC3 310 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 BAALCQ8WXS3 180 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 OR8D1Q8WZ84 308 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 RGP1Q92546 391 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 Q96MT0 163 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF396Q96N95 335 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 TEAD3Q99594 435 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 TIMM17AQ99595 171 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CIB1Q99828 191 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 UQCC2Q9BRT2 126 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 SLIRPQ9GZT3 109 aaKnown RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 NEUROG2Q9H2A3 272 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 SYT4Q9H2B2 425 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 ASB7Q9H672 318 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF442Q9H7R0 627 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CSNK1G1Q9HCP0 422 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 SDHAF2Q9NX18 166 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 VAPAQ9P0L0 249 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF229Q9UJW7 825 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 GGA2Q9UJY4 613 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CES1P1Q9UKY3 287 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 RBMX2Q9Y388 322 aaKnown RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 F11RQ9Y624 299 aaKnown RBP2.02□□□□□ -2.09
SCFD1-210ENST00000553693 GMEB1Q9Y692 573 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 U3KQA8 63 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 C2CD3Q4AC94 2353 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 BSNQ9UPA5 3926 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 POLQO75417 2590 aa2.02□□□□□ -2.09
SCFD1-210ENST00000553693 CITO14578 2027 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TLN1Q9Y490 2541 aaKnown RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 ZFC3H1O60293 1989 aaKnown RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 PLXNA2O75051 1894 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CACNA1DQ01668 2161 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 IGLV2-18A0A075B6J9 118 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 IGHV1-69DA0A0B4J2H0 117 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 A0A1B0GW15 77 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 MGAT4DA6NG13 374 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 H7C417 338 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 K7EM74 188 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 BET1O15155 118 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TCAPO15273 167 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CHST10O43529 356 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 RAD1O60671 282 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SS18L1O75177 396 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 RBBP9O75884 186 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SLC22A5O76082 557 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 GLSO94925 669 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 RPN2P04844 631 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 GP1BAP07359 652 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 KRT7P08729 469 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SLC35G6P0C7Q6 338 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 PGA5P0DJD9 388 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CCL2P13500 99 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 ANP32AP39687 249 aaKnown RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 GPR4P46093 362 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 PSMB2P49721 201 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 MAP3K7CLP57077 242 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SYNJ2BPP57105 145 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TAS2R39P59534 338 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 OR2B8PP59922 312 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 UBE2KP61086 200 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TPM4P67936 248 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SLC35A1P78382 337 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms