RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 KRTCAP3Q53RY4 240 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 KIAA2026Q5HYC2 2103 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 SHEQ5VZ18 495 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF880Q6PDB4 577 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 C11orf88Q6PI97 169 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 GSG1LQ6UXU4 331 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 UNQ6126/PRO20091Q6UXV3 157 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ACOT7LQ6ZUV0 252 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF546Q86UE3 836 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC51BQ86UW2 128 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ZGRF1Q86YA3 2104 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 Q8IYB0 196 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 KCNRGQ8N5I3 272 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 LRTM2Q8N967 370 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 C9orf106Q8NAJ2 232 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 PPP1R1CQ8WVI7 109 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 STARD4Q96DR4 205 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 PIK3IP1Q96FE7 263 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ELMOD3Q96FG2 381 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 FANCD2OSQ96PS1 177 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 TRIB1Q96RU8 372 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 VRK1Q99986 396 aaPredicted RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF286AQ9HBT8 521 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF71Q9NQZ8 489 aaPredicted RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF701Q9NV72 531 aaPredicted RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 TREM2Q9NZC2 230 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 UBQLN2Q9UHD9 624 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 TNFSF18Q9UNG2 199 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 C14orf166Q9Y224 244 aaKnown RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 PRR14LQ5THK1 2151 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 SVILO95425 2214 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 URB1O60287 2271 aaKnown RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 RPS10-NUDT3A0A1W2PQS6 291 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 LRP5LA4QPB2 252 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ANKRD34BA5PLL1 514 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CRYM-AS1A6NIL9 109 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM210A6NLX4 147 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 J3QT63 122 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SMPD2O60906 423 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 WDR1O75083 606 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 TSC22D2O75157 780 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 TNFSF13O75888 250 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CFDP00746 253 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 IFNA2P01563 188 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CRYABP02511 175 aaKnown RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 KITLGP21583 273 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 IL32P24001 234 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SSTR2P30874 369 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 OPRM1P35372 400 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 KCNJ3P48549 501 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ARPC4P59998 168 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 RND3P61587 244 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 PPP1CBP62140 327 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SORDQ00796 357 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 RBM39Q14498 530 aaKnown RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ANKRD55Q3KP44 614 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ESCO2Q56NI9 601 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF324BQ6AW86 544 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 Q6ZPA2 131 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SEM1Q6ZVN7 128 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SGPP2Q8IWX5 399 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 OR8H3Q8N146 312 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM58AQ8N1B3 248 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 GAPTQ8N292 157 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 RBMXL3Q8N7X1 1067 aaKnown RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 THAP6Q8TBB0 222 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 MAFIPQ8WZ33 124 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 MOB3AQ96BX8 217 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 MARS2Q96GW9 593 aaKnown RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SEC22AQ96IW7 307 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CYYR1Q96J86 154 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 C2orf50Q96LR7 162 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 MICU1Q9BPX6 476 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SYT3Q9BQG1 590 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF2Q9BSG1 426 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 HDHD3Q9BSH5 251 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 RSRP1Q9BUV0 290 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 RNF126Q9BV68 326 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SUCNR1Q9BXA5 334 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 MFFQ9GZY8 342 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ARL6Q9H0F7 186 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 LIME1Q9H400 295 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 SEBOXQ9HB31 216 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CDH20Q9HBT6 801 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 Q9N2K0 584 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 C12orf4Q9NQ89 552 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM86C1Q9NVL1 165 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 C1orf123Q9NWV4 160 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF581Q9P0T4 197 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF629Q9UEG4 869 aaPredicted RBP5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 KIF25Q9UIL4 384 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 KCNIP3Q9Y2W7 256 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CACNA1DQ01668 2161 aa5.12□□□□□ -1.59
VIPAS39-204ENST00000553576 CUL9Q8IWT3 2517 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 FXYD6-FXYD2A0A087WZ82 144 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 KIR2DS1A0A191URI9 304 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 RNF222A6NCQ9 220 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 LEUTXA8MZ59 168 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 F8VVB4 439 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 F8VWA3 439 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms