RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MPC1Q9Y5U8 109 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 OR5B21A6NL26 309 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 NME2P1O60361 137 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 NAPSAO96009 420 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 TK1P04183 234 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 NME2P22392 152 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 MAGEA5P43359 124 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 F2RL1P55085 397 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 TMEM33P57088 247 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 GLYATL2Q8WU03 294 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 NANOS1Q8WY41 292 aaKnown RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 MS4A7Q9GZW8 240 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 ARV1Q9H2C2 271 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 FAM212BQ9NTI7 297 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SHANK1Q9Y566 2161 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 C5orf49A4QMS7 147 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 TRAPPC2LH3BP13 241 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 TRIM77I1YAP6 450 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 DNASE2O00115 360 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-205ENST00000553474 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SNAPINO95295 136 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SP1P08047 785 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SEC11BP0C7V7 166 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 IL32P24001 234 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 RAB1AP62820 205 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 PLGLB1Q02325 96 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SRYQ05066 204 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 RPL7L1Q6DKI1 246 aaKnown RBP11.1□□□□□ -0.63
SHMT2-205ENST00000553474 FAM122CQ6P4D5 195 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 LDLRAD3Q86YD5 345 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 MCEMP1Q8IX19 187 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 LINC00469Q8N7U9 141 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 CLRN3Q8NCR9 226 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 OR5L1Q8NGL2 311 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 LILRB1Q8NHL6 650 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-205ENST00000553474 LYPD6BQ8NI32 183 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SNIP1Q8TAD8 396 aaKnown RBP11.1□□□□□ -0.63
SHMT2-205ENST00000553474 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 EXTL1Q92935 676 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 MARS2Q96GW9 593 aaKnown RBP11.1□□□□□ -0.63
SHMT2-205ENST00000553474 POM121L2Q96KW2 1035 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 MICU1Q9BPX6 476 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 Q9N2K0 584 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 FBXL17Q9UF56 701 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 WASF3Q9UPY6 502 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
SHMT2-205ENST00000553474 ARHGAP21Q5T5U3 1957 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 TRBV6-6A0A0A6YYG2 114 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 TOR1AO14656 332 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 GPR137BO60478 399 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 IGHV3-9P01782 118 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 MBPP02686 304 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-205ENST00000553474 HAAOP46952 286 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 RAB5CP51148 216 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 FXYD4P59646 89 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 ZNF169Q14929 603 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-205ENST00000553474 RTP5Q14D33 572 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 DAZAP2Q15038 168 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-205ENST00000553474 MST1LQ2TV78 715 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 ZNF573Q86YE8 665 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 IL22RA1Q8N6P7 574 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 ZFP62Q8NB50 900 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-205ENST00000553474 MDS2Q8NDY4 140 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 HPSE2Q8WWQ2 592 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 PURGQ9UJV8 347 aaKnown RBP11.09□□□□□ -0.63
SHMT2-205ENST00000553474 MSRB2Q9Y3D2 182 aa11.09□□□□□ -0.63
SHMT2-205ENST00000553474 LSM5Q9Y4Y9 91 aaKnown RBP11.09□□□□□ -0.63
SHMT2-205ENST00000553474 F8W036 122 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 MPPED1O15442 326 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 F10P00742 488 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 HLA-HP01893 362 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CELA3AP09093 270 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 H2AFB1P0C5Y9 115 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CD46P15529 392 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CTRB1P17538 263 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 AADACP22760 399 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 NPBWR2P48146 333 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 GNMTQ14749 295 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 TGIF1Q15583 401 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 CTRB2Q6GPI1 263 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 ATRAIDQ6UW56 229 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 FBXW12Q6X9E4 464 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 FOXRED2Q8IWF2 684 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 TMEM56Q96MV1 263 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 IFT22Q9H7X7 185 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 ZNF581Q9P0T4 197 aa11.08□□□□□ -0.64
SHMT2-205ENST00000553474 ATP23Q9Y6H3 246 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms