RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 FAM216AQ8WUB2 273 aa15.11■□□□□ 0.01
CPSF2-202ENST00000553427 S100A13Q99584 98 aa15.11■□□□□ 0.01
CPSF2-202ENST00000553427 NKX3-1Q99801 234 aaPredicted RBP15.11■□□□□ 0.01
CPSF2-202ENST00000553427 C19orf24Q9BVV8 132 aa15.11■□□□□ 0.01
CPSF2-202ENST00000553427 SF3B6Q9Y3B4 125 aaKnown RBP15.11■□□□□ 0.01
CPSF2-202ENST00000553427 DEGS1O15121 323 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 MAS1P04201 325 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 ZNF728P0DKX0 622 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 CCL3L1P16619 93 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 GABRA5P31644 462 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 RBM11P57052 281 aaKnown RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 UBA52P62987 128 aaKnown RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 EMX1Q04741 257 aaPredicted RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 EDDM3AQ14507 147 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 DEFB112Q30KQ8 113 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 HSD17B12Q53GQ0 312 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 FAM27D1Q5T7N8 215 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 HCP5Q6MZN7 132 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 CEACAM19Q7Z692 300 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 OSR2Q8N2R0 312 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 OR10K1Q8NGX5 313 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 MRPS24Q96EL2 167 aaKnown RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 C1orf147Q96MC9 270 aaPredicted RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 TCF7L1Q9HCS4 588 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 ING4Q9UNL4 249 aa15.1■□□□□ 0.01
CPSF2-202ENST00000553427 MRPS28Q9Y2Q9 187 aaKnown RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 SOX21Q9Y651 276 aaPredicted RBP15.1■□□□□ 0.01
CPSF2-202ENST00000553427 TRAV24A0A0B4J272 114 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 DNAJC9-AS1A6NH13 148 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 NPFFO15130 113 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 RRP9O43818 475 aaKnown RBP15.09■□□□□ 0.01
CPSF2-202ENST00000553427 HTR3BO95264 441 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 CSTBP04080 98 aaKnown RBP15.09■□□□□ 0.01
CPSF2-202ENST00000553427 CD37P11049 281 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 GTF2F2P13984 249 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 KCNJ3P48549 501 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 ERVFRD-1P60508 538 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 RPS25P62851 125 aaKnown RBP15.09■□□□□ 0.01
CPSF2-202ENST00000553427 KLRD1Q13241 179 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 MPV17LQ2QL34 196 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 PIGYQ3MUY2 71 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 UBE2UQ5VVX9 321 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 TMEM91Q6ZNR0 172 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 LRRTM1Q86UE6 522 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 LDLRAD3Q86YD5 345 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 TMEM86BQ8N661 226 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 SPATA3Q8NHX4 192 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 FCGR1BQ92637 280 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 MUL1Q969V5 352 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 FOXRED1Q96CU9 486 aaPredicted RBP15.09■□□□□ 0.01
CPSF2-202ENST00000553427 ZNF714Q96N38 554 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 PPIL3Q9H2H8 161 aaKnown RBP15.09■□□□□ 0.01
CPSF2-202ENST00000553427 PPA2Q9H2U2 334 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 NCOR1P1Q9H4R4 102 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 HEXA-AS1Q9H8Q6 139 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 GHRLQ9UBU3 117 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 ST3GAL6Q9Y274 331 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 UBE2J1Q9Y385 318 aaPredicted RBP15.09■□□□□ 0.01
CPSF2-202ENST00000553427 LRRC42Q9Y546 428 aa15.09■□□□□ 0.01
CPSF2-202ENST00000553427 DSCAML1Q8TD84 2053 aa15.08■□□□□ 0.01
CPSF2-202ENST00000553427 ARL6IP5O75915 188 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 SRMP19623 302 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 SCN1BQ07699 218 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 BAMBIQ13145 260 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 SLC22A6Q4U2R8 563 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 MIDNQ504T8 468 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 GLIPR1L1Q6UWM5 242 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 Q6YL49 198 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 SPARTQ8N0X7 666 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 OR4D6Q8NGJ1 314 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 CORO2AQ92828 525 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 TMEM203Q969S6 136 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 COQ2Q96H96 371 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 SLITRK2Q9H156 845 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 NDUFB11Q9NX14 153 aa15.08■□□□□ 0
CPSF2-202ENST00000553427 A0A0U1RQK1 487 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 MDFIC2A0A1B0GVS7 189 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 ODAMA1E959 279 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 RNASE1P07998 156 aaKnown RBP15.07■□□□□ 0
CPSF2-202ENST00000553427 UBBP0CG47 229 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 SERPINA2P20848 420 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 DLX1P56177 255 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 SSX1Q16384 188 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 KCTD21Q4G0X4 260 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 PAN3Q58A45 887 aaKnown RBP15.07■□□□□ 0
CPSF2-202ENST00000553427 C1orf100Q5SVJ3 147 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 GLT8D1Q68CQ7 371 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 AWAT2Q6E213 333 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 ZNF773Q6PK81 442 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 PDZD9Q8IXQ8 264 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 ZDHHC16Q969W1 377 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 NR1H4Q96RI1 486 aaPredicted RBP15.07■□□□□ 0
CPSF2-202ENST00000553427 TAS2R3Q9NYW6 316 aa15.07■□□□□ 0
CPSF2-202ENST00000553427 TRGV10A0A0A0MS01 117 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A10PA6NDY2 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A18PA6NE21 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A16PA6NEW6 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A20PA6NIJ5 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A8PA6NJQ4 464 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms