RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RPL36A-HNRNPH2H7BZ11 118 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 SOD3P08294 240 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 OR5AC1P0C628 307 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 ELK4P28324 431 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 SLC6A1P30531 599 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 TGFBR1P36897 503 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 C1QTNF8P60827 252 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF773Q6PK81 442 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 NEGR1Q7Z3B1 354 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 C10orf107Q8IVU9 208 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 FAM9CQ8IZT9 166 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 CASTOR1Q8WTX7 329 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 FAM210AQ96ND0 272 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 OLFM3Q96PB7 478 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 PEBP4Q96S96 227 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 ING2Q9H160 280 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 IMP3Q9NV31 184 aaKnown RBP2.93□□□□□ -1.94
SCFD1-209ENST00000553280 PSMD13Q9UNM6 376 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 C14orf166Q9Y224 244 aaKnown RBP2.93□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF835Q9Y2P0 537 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF706Q9Y5V0 76 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-209ENST00000553280 MYO15BQ96JP2 1530 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 YEATS2Q9ULM3 1422 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 ARID1AO14497 2285 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 IGHV2-26A0A0B4J1V2 119 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 TRAV8-2A0A0B4J237 113 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 A8MUU9 505 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 K7EPK0 472 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 PHYHO14832 338 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 ENTPD6O75354 484 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 CXorf1O96002 111 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 IGHV1-46P01743 117 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF286BP0CG31 522 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 PET100P0DJ07 73 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 SCGB1C2P0DMR2 95 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 SPNP16150 400 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 IDH2P48735 452 aaKnown RBP2.92□□□□□ -1.94
SCFD1-209ENST00000553280 TGM4P49221 684 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 RAB8AP61006 207 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 DGAT2L6Q6ZPD8 337 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 SCGB1C1Q8TD33 95 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 KLF14Q8TD94 323 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-209ENST00000553280 ITLN2Q8WWU7 325 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-209ENST00000553280 PPP1R36Q96LQ0 422 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 TMEM56Q96MV1 263 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 LINC01587Q99440 93 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF426Q9BUY5 554 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 C1orf50Q9BV19 199 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF436Q9C0F3 470 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-209ENST00000553280 HMGXB4Q9UGU5 601 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 DOCK9Q9BZ29 2069 aa2.92□□□□□ -1.94
SCFD1-209ENST00000553280 MYO10Q9HD67 2058 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 IZUMO1RA6ND01 250 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 GOLGA6L10A6NI86 522 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 MFNGO00587 321 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 GPR171O14626 319 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 RGS5O15539 181 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 TCF21O43680 179 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 CNMDO75829 334 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 RBBP9O75884 186 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 ORM1P02763 201 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 DLX6P56179 175 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 RAB25P57735 213 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 GOLGA7BQ2TAP0 167 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 TTMPQ5BVD1 217 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 MRPL2Q5T653 305 aaKnown RBP2.91□□□□□ -1.94
SCFD1-209ENST00000553280 TMEM215Q68D42 235 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 SLC25A45Q8N413 288 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF615Q8N8J6 731 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 ZIC4Q8N9L1 334 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 LFNGQ8NES3 379 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 OR2M3Q8NG83 312 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 TWIST2Q8WVJ9 160 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 FXYD5Q96DB9 178 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 ANAPC13Q9BS18 74 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 UGT2B28Q9BY64 529 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 FAM60AQ9NP50 221 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 ANKRD12Q6UB98 2062 aa2.91□□□□□ -1.94
SCFD1-209ENST00000553280 RPRD2Q5VT52 1461 aaKnown RBP2.9□□□□□ -1.94
SCFD1-209ENST00000553280 NUP214P35658 2090 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-209ENST00000553280 IGHV3OR16-8A0A075B7F1 116 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 EFCAB9A8MZ26 197 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-209ENST00000553280 FGF16O43320 207 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 CDRT1O95170 752 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 ATF1P18846 271 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 PMELP40967 661 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 CBX5P45973 191 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 TBPL2Q6SJ96 375 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 C16orf47Q6ZP98 133 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-209ENST00000553280 CLEC20AQ6ZU45 233 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 HMGN2P46Q86SG4 172 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 FUNDC1Q8IVP5 155 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 GATD1Q8NB37 220 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 MNS1Q8NEH6 495 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 DCUN1D5Q9BTE7 237 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 OR51E2Q9H255 320 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 SLC22A7Q9Y694 548 aa2.9□□□□□ -1.95
SCFD1-209ENST00000553280 DOCK8Q8NF50 2099 aa2.89□□□□□ -1.95
SCFD1-209ENST00000553280 TUBGCP6Q96RT7 1819 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms