RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 INTS14Q96SY0 518 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CGREF1Q99674 301 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 RTL8AQ9BWD3 113 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CLEC7AQ9BXN2 247 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 TLNRD1Q9H1K6 362 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 OR51J1Q9H342 316 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 YY1AP1Q9H869 796 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ELL3Q9HB65 397 aaPredicted RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 MEPEQ9NQ76 525 aaPredicted RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 LINC00527Q9UJ94 153 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 HHLA2Q9UM44 414 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 VSIG4Q9Y279 399 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 KCNK7Q9Y2U2 307 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CEPT1Q9Y6K0 416 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 DNAH7Q8WXX0 4024 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 TNCP24821 2201 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 IGKV1D-17A0A075B6S4 117 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 hADV38S2A0JD32 116 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ARRDC5A6NEK1 342 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 M0QX08 132 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 M0R135 149 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 TOR1AO14656 332 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 TXNL1O43396 289 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 XRCC2O43543 280 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 GMNNO75496 209 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 KRT36O76013 467 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 NDUFB8O95169 186 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 SPDEFO95238 335 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 BRI3O95415 125 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 OR5H8P0DN80 308 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ANXA7P20073 488 aaKnown RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 PPIBP23284 216 aaKnown RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 SOX2P48431 317 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 SNU13P55769 128 aaKnown RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 TCTAP57738 103 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 MTPNP58546 118 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 CSNK2BP67870 215 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 HTD2P86397 168 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 RUNX1Q01196 453 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 BDH1Q02338 343 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 LIPEQ05469 1076 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 MEF2CQ06413 473 aaPredicted RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 KRTAP27-1Q3LI81 207 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ANXA2RQ3ZCQ2 193 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 FAM76BQ5HYJ3 339 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 LDLRAD2Q5SZI1 272 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 GCNT6Q5T4J0 391 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ZFP1Q6P2D0 407 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 DNM1P34Q6PK57 102 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 DRAM2Q6UX65 266 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 DLEU7Q6UYE1 221 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 KCTD8Q6ZWB6 473 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 CCDC80Q76M96 950 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 SPATA24Q86W54 205 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 DHFR2Q86XF0 187 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ABHD12Q8N2K0 398 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 TMEM217Q8N7C4 229 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF676Q8N7Q3 588 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 OR56B2PQ8NGI1 322 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 OR6T1Q8NGN1 323 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 TMEM239Q8WW34 195 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 RGP1Q92546 391 aaPredicted RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 GTF2H4Q92759 462 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 RNF183Q96D59 192 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF799Q96GE5 643 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 RNF170Q96K19 258 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 KCTD14Q9BQ13 255 aaPredicted RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 NABP2Q9BQ15 211 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 NRIP2Q9BQI9 281 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 ABHD6Q9BV23 337 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 POLR2J2Q9GZM3 115 aaKnown RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 POLR2J3Q9H1A7 115 aaKnown RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 VCX3BQ9H321 246 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 KCNK15Q9H427 330 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 NMNAT1Q9HAN9 279 aaPredicted RBP3.97□□□□□ -1.77
CKAP4-203ENST00000553039 CMTM6Q9NX76 183 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 SIGLEC8Q9NYZ4 499 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 VAPAQ9P0L0 249 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 CD300AQ9UGN4 299 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 STUB1Q9UNE7 303 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 MPC1Q9Y5U8 109 aa3.97□□□□□ -1.77
CKAP4-203ENST00000553039 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.77
CKAP4-203ENST00000553039 TRBV5-3A0A0A0MS03 114 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 IGHV2-26A0A0B4J1V2 119 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 RFPL4AA6NLU0 287 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 EVPLLA8MZ36 301 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 FAM220BPB1ANY3 271 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 RFPL4AL1F8VTS6 287 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 LINC01619G3V211 115 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 H0YIZ8 118 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 ARPC2O15144 300 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 MTRF1O75570 445 aaKnown RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 CDK2AP2O75956 126 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 LYPD3O95274 346 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 IGHG4P01861 327 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 IFNA4P05014 189 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 CD14P08571 375 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 HOXB6P17509 224 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms