RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 RBM14Q96PK6 669 aaKnown RBP9.15□□□□□ -0.94
NEK3-204ENST00000552973 MBOAT4Q96T53 435 aa9.15□□□□□ -0.94
NEK3-204ENST00000552973 PPIL3Q9H2H8 161 aaKnown RBP9.15□□□□□ -0.94
NEK3-204ENST00000552973 LIN7BQ9HAP6 207 aa9.15□□□□□ -0.94
NEK3-204ENST00000552973 IMPAD1Q9NX62 359 aa9.15□□□□□ -0.94
NEK3-204ENST00000552973 TAS2R3Q9NYW6 316 aa9.15□□□□□ -0.94
NEK3-204ENST00000552973 ZNF281Q9Y2X9 895 aa9.15□□□□□ -0.94
NEK3-204ENST00000552973 TSSC4Q9Y5U2 329 aaPredicted RBP9.15□□□□□ -0.94
NEK3-204ENST00000552973 FUOMA2VDF0 154 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 BUB1B-PAK6H3BSN5 160 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 SLC33A1O00400 549 aaPredicted RBP9.14□□□□□ -0.95
NEK3-204ENST00000552973 SLC16A6O15403 523 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 OR2F2O95006 317 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 AMY1AP04745 511 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 AMY2AP04746 511 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 ISG15P05161 165 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 TMEM225BP0DP42 221 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 FCGR1AP12314 374 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 LMO1P25800 156 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 PTGFRP43088 359 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 LTC4SQ16873 150 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 C17orf58Q2M2W7 97 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 HLA-DRB5Q30154 266 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 ZIK1Q3SY52 487 aaPredicted RBP9.14□□□□□ -0.95
NEK3-204ENST00000552973 DEFB121Q5J5C9 76 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 TPTE2P1Q5T6R2 138 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 Q6P435 159 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 C16orf82Q7Z2V1 217 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 OR4D6Q8NGJ1 314 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 LEAP2Q969E1 77 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 C4orf36Q96KX1 117 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 NR1H4Q96RI1 486 aaPredicted RBP9.14□□□□□ -0.95
NEK3-204ENST00000552973 COMMD4Q9H0A8 199 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 HHLA2Q9UM44 414 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 PCDHGB5Q9Y5G0 923 aa9.14□□□□□ -0.95
NEK3-204ENST00000552973 PLXNB1O43157 2135 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 J3QRE1 110 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 K7EIL1 84 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 HCKP08631 526 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 HOXD3P31249 432 aaPredicted RBP9.13□□□□□ -0.95
NEK3-204ENST00000552973 ARHGDIBP52566 201 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 PRRX1P54821 245 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 KRTAP10-11P60412 298 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 ALKBH1Q13686 389 aaKnown RBP9.13□□□□□ -0.95
NEK3-204ENST00000552973 LPCAT4Q643R3 524 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 FDX2Q6P4F2 183 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 KCTD20Q7Z5Y7 419 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 ZNF329Q86UD4 541 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 LHFPL3Q86UP9 236 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 TRUB1Q8WWH5 349 aaKnown RBP9.13□□□□□ -0.95
NEK3-204ENST00000552973 PELI1Q96FA3 418 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 ZCCHC4Q9H5U6 513 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 INPP5EQ9NRR6 644 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 MYRFQ9Y2G1 1151 aa9.13□□□□□ -0.95
NEK3-204ENST00000552973 WI2-2373I1.2A0A1W2PRP0 233 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 OR4C45A6NMZ5 311 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 ZNF729A6NN14 1252 aaPredicted RBP9.12□□□□□ -0.95
NEK3-204ENST00000552973 H0YJX3 145 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 LY6LH3BQJ8 138 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 CD34P28906 385 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 CEACAM3P40198 252 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 MNDAP41218 407 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 GLP1RP43220 463 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 CCR9P51686 369 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 ZP1P60852 638 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 SLC35A2P78381 396 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 HNF4GQ14541 408 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 CDK5R1Q15078 307 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 ZSCAN26Q16670 478 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 ACBD7Q8N6N7 88 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 OR13A1Q8NGR1 328 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 RFESDQ8TAC1 157 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 PYDC1Q8WXC3 89 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 RPEQ96AT9 228 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 KIRREL1Q96J84 757 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 ZNF649Q9BS31 505 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 ISG20L2Q9H9L3 353 aaKnown RBP9.12□□□□□ -0.95
NEK3-204ENST00000552973 LINC00527Q9UJ94 153 aa9.12□□□□□ -0.95
NEK3-204ENST00000552973 MEIKINA0A087WXM9 373 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 A0A087X0M5 115 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 TRAV39A0A0B4J263 110 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 KBTBD11-OT1A0A1B0GTJ5 212 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 A0A1B0GX30 115 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 A0A1W2PPE3 182 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 E9PI62 339 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 EI24O14681 340 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 MT-ND2P03891 347 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 CSN2P05814 226 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 SNRNP70P08621 437 aaKnown RBP9.11□□□□□ -0.95
NEK3-204ENST00000552973 FAM106CPP0CH98 169 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 GNG10P50151 68 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 RASSF2P50749 326 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 HES1Q14469 280 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 KISS1Q15726 138 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 MEDAGQ5VYS4 303 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 CCDC144NLQ6NUI1 221 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 C11orf87Q6NUJ2 197 aa9.11□□□□□ -0.95
NEK3-204ENST00000552973 C18orf65Q6ZTR6 163 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms