RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 LIMS3P0CW19 117 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 LIMS4P0CW20 117 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 PSKH1P11801 424 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 S100A1P23297 94 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 PPP3R1P63098 170 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 RIPPLY1Q0D2K3 151 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ATAD3CQ5T2N8 411 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ZNF684Q5T5D7 378 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 DDI2Q5TDH0 399 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 LIPKQ5VXJ0 399 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 PLBD1Q6P4A8 553 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 HAGHLQ6PII5 290 aaPredicted RBP7.09□□□□□ -1.27
TMEM116-217ENST00000552801 NRARPQ7Z6K4 114 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ZNRF1Q8ND25 227 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 OR4F17Q8NGA8 305 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 CAPSLQ8WWF8 208 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 FOXRED1Q96CU9 486 aaPredicted RBP7.09□□□□□ -1.27
TMEM116-217ENST00000552801 RNFT2Q96EX2 444 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ST6GAL2Q96JF0 529 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 OR4F4Q96R69 305 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 DDOQ99489 341 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ZNF649Q9BS31 505 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 NMNAT2Q9BZQ4 307 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ELL3Q9HB65 397 aaPredicted RBP7.09□□□□□ -1.27
TMEM116-217ENST00000552801 NEK6Q9HC98 313 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 EXOSC4Q9NPD3 245 aaKnown RBP7.09□□□□□ -1.27
TMEM116-217ENST00000552801 RASL12Q9NYN1 266 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 TVP23BQ9NYZ1 205 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 ZNF221Q9UK13 617 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 PITPNC1Q9UKF7 332 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 FOXJ3Q9UPW0 622 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 EXOGQ9Y2C4 368 aaKnown RBP7.09□□□□□ -1.27
TMEM116-217ENST00000552801 POLDIP2Q9Y2S7 368 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 SIGLEC9Q9Y336 463 aa7.09□□□□□ -1.27
TMEM116-217ENST00000552801 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 TMEM269A0A1B0GVZ9 245 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 HMX3A6NHT5 357 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 SELENOFO60613 162 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 FCN3O75636 299 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 CCNKO75909 580 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 NXPH2O95156 264 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 TFF1P04155 84 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 PSG2P11465 335 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 FAHP16930 419 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 HTR1FP30939 366 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RPS25P62851 125 aaKnown RBP7.08□□□□□ -1.28
TMEM116-217ENST00000552801 SCN1BQ07699 218 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 BAK1Q16611 211 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 AANATQ16613 207 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 CEACAM21Q3KPI0 293 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 PLA1AQ53H76 456 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 LCN1P1Q5VSP4 162 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RSBN1Q5VWQ0 802 aaPredicted RBP7.08□□□□□ -1.28
TMEM116-217ENST00000552801 NXNL2Q5VZ03 156 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ZNF573Q86YE8 665 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 MKXQ8IYA7 352 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ZNF561Q8N587 486 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR8B12Q8NGG6 310 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR5A2Q8NGI9 324 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR13D1Q8NGV5 346 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR2T27Q8NH04 317 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OTOSQ8NHW6 89 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RPS4Y2Q8TD47 263 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RFKQ969G6 155 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 R3HDM4Q96D70 268 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 PPP1R3EQ9H7J1 279 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ERVK13-1Q9NX77 482 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR14J1Q9UGF5 321 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 IKZF2Q9UKS7 526 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 PIGLQ9Y2B2 252 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 LRP12Q9Y561 859 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ACOD1A6NK06 481 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RFPL4AA6NLU0 287 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RFPL4AL1F8VTS6 287 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RHBDL1O75783 438 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 CDRT1O95170 752 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 NRASP01111 189 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ARG1P05089 322 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ANOS1P23352 680 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ACKR3P25106 362 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 RIDAP52758 137 aaKnown RBP7.08□□□□□ -1.28
TMEM116-217ENST00000552801 EFNB2P52799 333 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR12D2P58182 307 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 SNAPC1Q16533 368 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 BEAN1Q3B7T3 259 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 SLC35D3Q5M8T2 416 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 LINC01590Q5TEZ4 76 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 C22orf42Q6IC83 251 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 PRSS45Q7RTY3 260 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 BCDIN3DQ7Z5W3 292 aaKnown RBP7.08□□□□□ -1.28
TMEM116-217ENST00000552801 GID4Q8IVV7 300 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 TCTE3Q8IZS6 198 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 LYG1Q8N1E2 194 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 ASCC1Q8N9N2 400 aaKnown RBP7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR4M1Q8NGD0 313 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 TNFRSF14Q92956 283 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 PRSS22Q9GZN4 317 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 MEGF9Q9H1U4 602 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 OR51I2Q9H344 312 aa7.08□□□□□ -1.28
TMEM116-217ENST00000552801 INPP5EQ9NRR6 644 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms