RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 IDI2-AS1Q9NZ38 188 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 TAAR2Q9P1P5 351 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 XCL2Q9UBD3 114 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 SLIT1O75093 1534 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 RTEL1-TNFRSF6BF6WH68 1400 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 DENND4AQ7Z401 1863 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 DIP2AQ14689 1571 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 MTCL1Q9Y4B5 1905 aaKnown RBP3.29□□□□□ -1.88
USP44-208ENST00000552440 RALGAPBQ86X10 1494 aa3.29□□□□□ -1.88
USP44-208ENST00000552440 PALLDQ8WX93 1383 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 MYO5CQ9NQX4 1742 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 IGHV3OR16-13A0A075B7E8 117 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 H7C417 338 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SLC17A2O00624 439 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 XKRYO14609 159 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 RDH16O75452 317 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 REG1AP05451 166 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CD79AP11912 226 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 GGT2P36268 569 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CACNG7P62955 275 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 IHHQ14623 411 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 LRRC36Q1X8D7 754 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF630Q2M218 657 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 CNPY1Q3B7I2 92 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 TMEM255AQ5JRV8 349 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 AVPI1Q5T686 147 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 OPN5Q6U736 354 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 TMEM205Q6UW68 189 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 UGT2A3Q6UWM9 527 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF771Q7L3S4 317 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 NAA40Q86UY6 237 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CALHM3Q86XJ0 350 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 C1orf158Q8N1D5 194 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CADM2Q8N3J6 435 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF485Q8NCK3 441 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 BEST4Q8NFU0 473 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 OR2M7Q8NG81 312 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 OR8J3Q8NGG0 315 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 OR9A2Q8NGT5 310 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF285Q96NJ3 590 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SUCNR1Q9BXA5 334 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SLIRPQ9GZT3 109 aaKnown RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 ABCG5Q9H222 651 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ISG20L2Q9H9L3 353 aaKnown RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 DMAC2Q9NW81 257 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 MTFP1Q9UDX5 166 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF223Q9UK11 482 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 TROQ12816 1431 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 KIAA1107Q9UPP5 1409 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 GREB1LQ9C091 1923 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 TIAM1Q13009 1591 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SAMD9LQ8IVG5 1584 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 NCOA2Q15596 1464 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CACNA1IQ9P0X4 2223 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 TMEM2Q9UHN6 1383 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 PHF3Q92576 2039 aaKnown RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 A0A1B0GV90 55 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 TMEM150BA6NC51 233 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ATP6V1G2-DDX39BF2Z307 99 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 C6orf47O95873 294 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 GKN3PP0CG01 181 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SULT1A3P0DMM9 295 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SULT1A4P0DMN0 295 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF708P17019 499 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 VDAC1P21796 283 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CD34P28906 385 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 MIPP30301 263 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SPRP35270 261 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 CTRLP40313 264 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 LGALS7P47929 136 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 PRR3P79522 188 aaKnown RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 EMX1Q04741 257 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 QPRTQ15274 297 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SURF2Q15527 256 aaPredicted RBP3.28□□□□□ -1.88
USP44-208ENST00000552440 KIAA1644Q3SXP7 199 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ZNF684Q5T5D7 378 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 TEX36Q5VZQ5 186 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 NEGR1Q7Z3B1 354 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CDC20BQ86Y33 519 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 RAB42Q8N4Z0 105 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 OR10J6PQ8NGY7 276 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 OR10D3Q8NH80 312 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 ABHD3Q8WU67 409 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 SMARCD1Q96GM5 515 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 DIRAS2Q96HU8 199 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 MARVELD1Q9BSK0 173 aa3.28□□□□□ -1.88
USP44-208ENST00000552440 CLIP1P30622 1438 aa3.28□□□□□ -1.89
USP44-208ENST00000552440 KIAA1210Q9ULL0 1709 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 BRCA1P38398 1863 aaKnown RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 ARHGAP35Q9NRY4 1499 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 IGHV3OR16-9A0A0B4J2B5 98 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 PQLC2LA1A4F0 135 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
USP44-208ENST00000552440 FAM220BPB1ANY3 271 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 I3L4J1 428 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 AGPAT2O15120 278 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 ORC5O43913 435 aa3.27□□□□□ -1.89
USP44-208ENST00000552440 OR5G3P0C626 314 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms