RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 FAM27D1Q5T7N8 215 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 Q6P435 159 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 UNQ9370/PRO34162Q6UXP9 181 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 OSR2Q8N2R0 312 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 TPRX1Q8N7U7 411 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 OR51T1Q8NGJ9 327 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 PHYHIPQ92561 330 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 ZNF714Q96N38 554 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 HEXA-AS1Q9H8Q6 139 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 ZMAT3Q9HA38 289 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 ST3GAL6Q9Y274 331 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 SF3B6Q9Y3B4 125 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 SOX21Q9Y651 276 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 A0A0G2JK05 382 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 MDFIC2A0A1B0GVS7 189 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 A0A1W2PRD5 423 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 A0A1W2PRF3 423 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 A0A1W2PRM7 423 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 MEX3AA1L020 520 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 DNAJC9-AS1A6NH13 148 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 SLC33A1O00400 549 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 HSPB6O14558 160 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 NPFFO15130 113 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 RRP9O43818 475 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 GTF2F2P13984 249 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 ERP29P30040 261 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 GLT8D1Q68CQ7 371 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 GLIPR1L1Q6UWM5 242 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 PHC2Q8IXK0 858 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 ZDHHC22Q8N966 263 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 FOXRED1Q96CU9 486 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 UQCC2Q9BRT2 126 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 ING3Q9NXR8 418 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 LINC00312Q9Y6C7 94 aa15.14■□□□□ 0.01
PRPF40B-216ENST00000552301 TRGV10A0A0A0MS01 117 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 COL6A5A8TX70 2615 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 ARL6IP5O75915 188 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 OR7C1O76099 320 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 PAHP00439 452 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 CSN2P05814 226 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 UCHL1P09936 223 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 COX7A1P24310 79 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 GABRA5P31644 462 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 UBE2E1P51965 193 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 RBM11P57052 281 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 UBA52P62987 128 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 ACTG1P63261 375 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 EMX1Q04741 257 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 ATXN7L3Q14CW9 347 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 TUSC1Q2TAM9 212 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 KRBOX4Q5JUW0 171 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 ZNF782Q6ZMW2 699 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 LINC00596Q86U02 117 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 Q8NFD4 153 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 TNFRSF14Q92956 283 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 DUX5Q96PT3 197 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 ESM1Q9NQ30 184 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 DSCAML1Q8TD84 2053 aa15.13■□□□□ 0.01
PRPF40B-216ENST00000552301 A0A0U1RQK1 487 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 MEIOCA2RUB1 952 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 SC5DO75845 299 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 RBP4P02753 201 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 FBP1P09467 338 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 SRMP19623 302 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 AESQ08117 197 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 MPV17LQ2QL34 196 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 NHLRC3Q5JS37 347 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 FAM216AQ8WUB2 273 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 FCGR1BQ92637 280 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 SLC25A28Q96A46 364 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 UBE2J1Q9Y385 318 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 LRRC42Q9Y546 428 aa15.12■□□□□ 0.01
PRPF40B-216ENST00000552301 CUBNO60494 3623 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 ODAMA1E959 279 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 C17orf98A8MV24 154 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 PSMB9P28065 219 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 SAA4P35542 130 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 KCNJ3P48549 501 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 DLX6P56179 175 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 ATAD3CQ5T2N8 411 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 SPARTQ8N0X7 666 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 OR4D6Q8NGJ1 314 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 NEK7Q8TDX7 302 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 MRPS24Q96EL2 167 aaKnown RBP15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 CST11Q9H112 138 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 GAL3ST2Q9H3Q3 398 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 GHRLQ9UBU3 117 aa15.11■□□□□ 0.01
PRPF40B-216ENST00000552301 TRAV24A0A0B4J272 114 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 A0A1W2PP11 408 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 GEMIN2O14893 280 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 HOXA3O43365 443 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 CRTAPO75718 401 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 CLPXO76031 633 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 UBBP0CG47 229 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 GLIPR1P48060 266 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 LGALS4P56470 323 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 ZNF773Q6PK81 442 aa15.1■□□□□ 0.01
PRPF40B-216ENST00000552301 TMEM91Q6ZNR0 172 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms