RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	PSG7	Q13046	419 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	AANAT	Q16613	207 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ALKBH6	Q3KRA9	238 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PHLDA2	Q53GA4	152 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	WDR86	Q86TI4	376 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	C17orf78	Q8N4C9	275 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZNF610	Q8N9Z0	462 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	STARD4	Q96DR4	205 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ARPC5L	Q9BPX5	153 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SYT3	Q9BQG1	590 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZNF471	Q9BX82	626 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RIMS4	Q9H426	269 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	IFT22	Q9H7X7	185 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SLC2A9	Q9NRM0	540 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MED9	Q9NWA0	146 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	GSKIP	Q9P0R6	139 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PROCR	Q9UNN8	238 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MEMO1	Q9Y316	297 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SHANK1	Q9Y566	2161 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZFHX4	Q86UP3	3567 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TRBV6-6	A0A0A6YYG2	114 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TRAV24	A0A0B4J272	114 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MBD3L3	A6NE82	208 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	POM121C	A8CG34	1229 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TRDC	B7Z8K6	153 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	LOC400499	M0QZD8	3231 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	HSPB6	O14558	160 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	WDR1	O75083	606 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	IFNA21	P01568	189 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SCT	P09683	121 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	LUM	P51884	338 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RAB32	Q13637	225 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TOR2A	Q5JU69	321 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SEM1	Q6ZVN7	128 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CXorf67	Q86X51	503 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SCCPDH	Q8NBX0	429 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR5T2	Q8NGG2	359 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RRNAD1	Q96FB5	475 aa	Known RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CXorf58	Q96LI9	332 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SUCNR1	Q9BXA5	334 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR5AC2	Q9NZP5	309 aa		11.94	□□□□□ -0.5
RAB3IP-216	ENST00000552199	GTF3C1	Q12789	2109 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	KIR2DS1	A0A191URI9	304 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	hCG_1807616	A0A1W2PRN6	198 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199		F5H0A9	414 aa	Predicted RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	C3orf80	F5H4A9	247 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	HS3ST1	O14792	307 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SLC34A2	O95436	690 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PDGFA	P04085	211 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR5AC1	P0C628	307 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PET100	P0DJ07	73 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MPV17	P39210	176 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	KIR2DS4	P43632	304 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	KIR2DS1	Q14954	304 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	IAH1	Q2TAA2	248 aa	Predicted RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SP6	Q3SY56	376 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	GGNBP1	Q5YKI7	109 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	THOC7	Q6I9Y2	204 aa	Known RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199		Q6P435	159 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	C5orf24	Q7Z6I8	188 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PDZD9	Q8IXQ8	264 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	LRTM2	Q8N967	370 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MRPL30	Q8TCC3	161 aa	Known RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	KLF14	Q8TD94	323 aa	Predicted RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	MRPL24	Q96A35	216 aa	Known RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PHYHIPL	Q96FC7	376 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	DMRTA2	Q96SC8	542 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ADAT1	Q9BUB4	502 aa	Known RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	REG4	Q9BYZ8	158 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	SLC25A32	Q9H2D1	315 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RASL12	Q9NYN1	266 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ATP23	Q9Y6H3	246 aa		11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	PRRC2C	Q9Y520	2896 aa	Known RBP	11.93	□□□□□ -0.5
RAB3IP-216	ENST00000552199	DEGS1	O15121	323 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	DIRAS3	O95661	229 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TK1	P04183	234 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	NUP62	P37198	522 aa	Predicted RBP	11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ERVK11-1	P61568	191 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	P2RY6	Q15077	328 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	LIAT1	Q6ZQX7	453 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199		Q8IYB0	196 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CCDC71L	Q8N9Z2	235 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR11L1	Q8NGX0	322 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	ANGPTL6	Q8NI99	470 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	RDH5	Q92781	318 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OBP2B	Q9NPH6	170 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	DNAJB11	Q9UBS4	358 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	TUBD1	Q9UJT1	453 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	POLDIP2	Q9Y2S7	368 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199		I3L521	148 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	BET1	O15155	118 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	CTXN2	P0C2S0	81 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	HERPUD1	Q15011	391 aa		11.92	□□□□□ -0.5
RAB3IP-216	ENST00000552199	OR8G1	Q15617	311 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms