RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 NDUFV3P56181 108 aaKnown RBP4.87□□□□□ -1.63
VPS29-210ENST00000552130 H2BFSP57053 126 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 C1QTNF8P60827 252 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 HSPE1P61604 102 aaKnown RBP4.87□□□□□ -1.63
VPS29-210ENST00000552130 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 FZD2Q14332 565 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 TMEM78Q5T7P6 136 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 SAMD13Q5VXD3 122 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 SPATA31B1PQ5VZV4 182 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 TBPL2Q6SJ96 375 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 IGFL2Q6UWQ7 119 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 Q6ZRP5 223 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 RFLNBQ8N5W9 214 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 UBAC2Q8NBM4 344 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 OR51A2Q8NGJ7 313 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 LHFPL5Q8TAF8 219 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 GEMIN6Q8WXD5 167 aaKnown RBP4.87□□□□□ -1.63
VPS29-210ENST00000552130 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 ANKRD36BP1Q96IX9 119 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 OR52B2Q96RD2 323 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 RASL12Q9NYN1 266 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 ZNF226Q9NYT6 803 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 PKIGQ9Y2B9 76 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 UGT2A1Q9Y4X1 527 aa4.87□□□□□ -1.63
VPS29-210ENST00000552130 YTHDF2Q9Y5A9 579 aaKnown RBP4.87□□□□□ -1.63
VPS29-210ENST00000552130 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 MAP1LC3B2A6NCE7 125 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 D6RAR5 112 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 K7EP13 123 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 EIF1BO60739 113 aaKnown RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 PFN1P07737 140 aaKnown RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 CSF3P09919 207 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 COX4I1P13073 169 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CD1EP15812 388 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 S100A7P31151 101 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 EIF1P41567 113 aaKnown RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 MARCKSL1P49006 195 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 PSMB2P49721 201 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 MEOX2P50222 304 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CYCSP99999 105 aaKnown RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 ZNF146Q15072 292 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 SIX1Q15475 284 aaPredicted RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 GSG1Q2KHT4 349 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 N4BP2L1Q5TBK1 243 aaPredicted RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 TSPO2Q5TGU0 170 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 TOMM20LQ6UXN7 152 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CLEC19AQ6UXS0 136 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 ALKAL1Q6UXT8 129 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 GSG1LQ6UXU4 331 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 TEX43Q6ZNM6 134 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 TGIF2LYQ8IUE0 185 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 OR11H7Q8NGC8 314 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 OR4M1Q8NGD0 313 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 OR1S1Q8NH92 325 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 GALNT14Q96FL9 552 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 PPP1R2P1Q96PQ5 205 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 GPER1Q99527 375 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CDX2Q99626 313 aaPredicted RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 SLC17A9Q9BYT1 436 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 MAP1LC3BQ9GZQ8 125 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CCDC90BQ9GZT6 254 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 OR51I2Q9H344 312 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 TPT1P8Q9HAU6 139 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CLCF1Q9UBD9 225 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 TRMT112Q9UI30 125 aaKnown RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 ZNF780BQ9Y6R6 833 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CLUHO75153 1309 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 CACNA1IQ9P0X4 2223 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 PIK3C2GO75747 1445 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 SOGA1O94964 1423 aa4.86□□□□□ -1.63
VPS29-210ENST00000552130 ZNF608Q9ULD9 1512 aaPredicted RBP4.86□□□□□ -1.63
VPS29-210ENST00000552130 A0A087WW49 117 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 A0A087WWV3 80 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 FAM183AA6NL82 134 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 DHRS3O75911 302 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 OR2J2O76002 312 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 PDYNP01213 254 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 OR4A8P0C604 315 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 OR56A5P0C7T3 313 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 LAMP1P11279 417 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 RAB3BP20337 219 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 CD70P32970 193 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 TAS2R46P59540 309 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 HPCAP84074 193 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 BATFQ16520 125 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 LCN12Q6JVE5 192 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 DCUN1D2Q6PH85 259 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 CXCL17Q6UXB2 119 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 TMPPEQ6ZT21 453 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 OR5J2Q8NH18 312 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 ZNF420Q8TAQ5 688 aaPredicted RBP4.85□□□□□ -1.63
VPS29-210ENST00000552130 MRPL48Q96GC5 212 aaKnown RBP4.85□□□□□ -1.63
VPS29-210ENST00000552130 AURKBQ96GD4 344 aaPredicted RBP4.85□□□□□ -1.63
VPS29-210ENST00000552130 CLEC7AQ9BXN2 247 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 RSPO3Q9BXY4 272 aaPredicted RBP4.85□□□□□ -1.63
VPS29-210ENST00000552130 EBPLQ9BY08 206 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 GABARAPL3Q9BY60 117 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 OCR1Q9BZK8 76 aa4.85□□□□□ -1.63
VPS29-210ENST00000552130 SLC25A31Q9H0C2 315 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms