RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 TUBA4BQ9H853 241 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LINC00574Q9H8X3 128 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TPT1P8Q9HAU6 139 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 GRPEL1Q9HAV7 217 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PLEKHA1Q9HB21 404 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CACYBPQ9HB71 228 aaKnown RBP1.66□□□□□ -2.14
PTCH1-223ENST00000551623 TMEM27Q9HBJ8 222 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 HES4Q9HCC6 221 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 LZTFL1Q9NQ48 299 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 PLSCR3Q9NRY6 295 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 ZDHHC18Q9NUE0 388 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 ADA2Q9NZK5 511 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 OR6C3Q9NZP0 311 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 CYB5R1Q9UHQ9 305 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 FBXO7Q9Y3I1 522 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 MPC1Q9Y5U8 109 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 DNAH11Q96DT5 4516 aa1.66□□□□□ -2.14
PTCH1-223ENST00000551623 FAT2Q9NYQ8 4349 aa1.65□□□□□ -2.14
PTCH1-223ENST00000551623 TNCP24821 2201 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KIR2DL5BA0A0G2JN68 375 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KIR2DL5BA0A0G2JPC4 375 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 hCG_38984A0A1B0GV85 526 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 hDV102S1A0JD36 115 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM247A6NEH6 219 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 GGT3PA6NGU5 568 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CBY3A6NI87 242 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 C11orf94C9JXX5 98 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 H3BSH0 61 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 M0R135 149 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 UBE2CO00762 179 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 AKR7A2O43488 359 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TPPPO94811 219 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TXNDC12O95881 172 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CST4P01036 141 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TFAP2AP05549 437 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 VIMP08670 466 aaKnown RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 P0DMU3 169 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 FAM231AP0DMU4 169 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 FAM231CP0DMU5 169 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 MYL2P10916 166 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TCP1P17987 556 aaKnown RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 FUT1P19526 365 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 EDN2P20800 178 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CFL1P23528 166 aaKnown RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 MPZP25189 248 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 POU1F1P28069 291 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 GCAP28676 217 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 ERP29P30040 261 aaKnown RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 S100A3P33764 101 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 SERPINB5P36952 375 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 MNDAP41218 407 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CDKN2CP42773 168 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CCT5P48643 541 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RAB7AP51149 207 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RAB9AP51151 201 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RPS6KA3P51812 740 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 XGP55808 180 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 DSCR10P59022 87 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 FAM3AP98173 230 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RAB40BQ12829 278 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KLF5Q13887 457 aaPredicted RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 PCLAFQ15004 111 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RGNQ15493 299 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TIGD6Q17RP2 521 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RFX4Q33E94 735 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 SMIM21Q3B7S5 101 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CCDC153Q494R4 210 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KLHL12Q53G59 568 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 MESTQ5EB52 335 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 SOHLH1Q5JUK2 328 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 GLYATL3Q5SZD4 288 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 AGBL2Q5U5Z8 902 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 Q5VSD8 79 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 NANOGP8Q6NSW7 305 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 REEP3Q6NUK4 255 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TTC33Q6PID6 262 aaPredicted RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF497Q6ZNH5 498 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CPLX4Q7Z7G2 160 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 ADCK1Q86TW2 530 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 NAA40Q86UY6 237 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CATSPERDQ86XM0 798 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KIR2DL5AQ8N109 375 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 OR8H2Q8N162 312 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 ABHD12Q8N2K0 398 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 FTMTQ8N4E7 242 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 C10orf53Q8N6V4 93 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 Q8N9W7 124 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM104Q8NE00 496 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CSNK2A3Q8NEV1 391 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 OR52L1Q8NGH7 329 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 OR9G4Q8NGQ1 327 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 OR2T27Q8NH04 317 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 OR8S1Q8NH09 359 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KIR2DL5BQ8NHK3 375 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 MOSPD2Q8NHP6 518 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 NDNFQ8TB73 568 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 HPSE2Q8WWQ2 592 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 AQP3Q92482 292 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RGP1Q92546 391 aaPredicted RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 CORO2AQ92828 525 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms