RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 BCL2L14Q9BZR8 327 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 SLC19A3Q9BZV2 496 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 IQCGQ9H095 443 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 PARLQ9H300 379 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 KAT8Q9H7Z6 458 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 MOB1AQ9H8S9 216 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF702PQ9H963 129 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 BEX1Q9HBH7 125 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 POLE4Q9NR33 117 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ADA2Q9NZK5 511 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 MIOXQ9UGB7 285 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 TBK1Q9UHD2 729 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF229Q9UJW7 825 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF222Q9UK12 451 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF346Q9UL40 294 aaKnown RBP1.83□□□□□ -2.12
CPSF6-207ENST00000551516 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 PKHD1P08F94 4074 aa1.83□□□□□ -2.12
CPSF6-207ENST00000551516 VPS13DQ5THJ4 4388 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 DNAH2Q9P225 4427 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TANC2Q9HCD6 1990 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IGLV4-3A0A075B6K6 122 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IGLV1-36A0A0B4J1U3 117 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TRAV40A0A0B4J280 105 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IGHV1-69DA0A0B4J2H0 117 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 MEX3AA1L020 520 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 NDUFAF8A1L188 74 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ANKRD30BLA7E2S9 258 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CLDN25C9JDP6 229 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 H7C423 109 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 M0QX08 132 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 COPEO14579 308 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 PHYHO14832 338 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 RER1O15258 196 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 HDAC3O15379 428 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 SPAG7O75391 227 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 AHSA1O95433 338 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CPSF4O95639 269 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IGHV1-69P01742 117 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 MT-ND1P03886 318 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 SEMG1P04279 462 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IL6P05231 212 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 OR9G9P0C7N8 305 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 RRASP10301 218 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 HSD17B1P14061 328 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ACADSP16219 412 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CTLA4P16410 223 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF823P16415 610 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TUBG1P23258 451 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CXCR1P25024 350 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 LAP3P28838 519 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 S100A3P33764 101 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 MDH2P40926 338 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 AQP2P41181 271 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CSNK1A1P48729 337 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CRISP3P54108 245 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 NDUFV3P56181 108 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 DSTNP60981 165 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ERVK11-1P61568 191 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 PPP1CBP62140 327 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 RPS23P62266 143 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 VSNL1P62760 191 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 HSF2Q03933 536 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 GLO1Q04760 184 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 LRRC74AQ0VAA2 488 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 BNIP1Q12981 228 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 PDZK1IP1Q13113 114 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 FADDQ13158 208 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 SCGB2A2Q13296 93 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 AANATQ16613 207 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TRMT5Q32P41 509 aaKnown RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 MESTQ5EB52 335 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF311Q5JNZ3 666 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CEP85LQ5SZL2 805 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 UTF1Q5T230 341 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ZC2HC1BQ5TFG8 222 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 GFI1BQ5VTD9 330 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 HHATQ5VTY9 493 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 OTPQ5XKR4 325 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CARD17Q5XLA6 110 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 REP15Q6BDI9 236 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 REEP3Q6NUK4 255 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 EPGNQ6UW88 154 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 Q6ZSR3 168 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF621Q6ZSS3 439 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TCF23Q7RTU1 214 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 C1orf174Q8IYL3 243 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CENPSQ8N2Z9 138 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 CADM2Q8N3J6 435 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 PNKDQ8N490 385 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 BPIFB2Q8N4F0 458 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 TEX29Q8N6K0 151 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 NOXO1Q8NFA2 376 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 OR8G5Q8NG78 346 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 OR4F5Q8NH21 305 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 PFN4Q8NHR9 129 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF420Q8TAQ5 688 aaPredicted RBP1.82□□□□□ -2.12
CPSF6-207ENST00000551516 AGR3Q8TD06 166 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 ADAMTS16Q8TE57 1224 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 NPRL2Q8WTW4 380 aa1.82□□□□□ -2.12
CPSF6-207ENST00000551516 IFT81Q8WYA0 676 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms