RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 A0A1W2PPK0 400 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 DEGS1O15121 323 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 MRPS14O60783 128 aaKnown RBP12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 MELTFP08582 738 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 FBP1P09467 338 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 DLX1P56177 255 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 GABARAPL2P60520 117 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 TPBGQ13641 420 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 MIDNQ504T8 468 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 ACSM3Q53FZ2 586 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 HCP5Q6MZN7 132 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 UNQ9370/PRO34162Q6UXP9 181 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 NKX3-1Q99801 234 aaPredicted RBP12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 TMED9Q9BVK6 235 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 PPA2Q9H2U2 334 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 PCDHB16Q9NRJ7 776 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
PRPF40B-211ENST00000551063 A0A0G2JK05 382 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 MEGF11A6BM72 1044 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 DENRO43583 198 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 SC5DO75845 299 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 CDRT1O95170 752 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 HTR3BO95264 441 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 CSTBP04080 98 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 MAS1P04201 325 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 PSMA1P25786 263 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 SAA4P35542 130 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 PRB3Q04118 309 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 GPR176Q14439 515 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 TRAM1Q15629 374 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 LIPKQ5VXJ0 399 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 ZNF367Q7RTV3 350 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 LINC00596Q86U02 117 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 LYPD6Q86Y78 171 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 JAGN1Q8N5M9 183 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 TPRX1Q8N7U7 411 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 OR10K1Q8NGX5 313 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 PHYHIPQ92561 330 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 DUX5Q96PT3 197 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 FAM96BQ9Y3D0 163 aa12.59□□□□□ -0.39
PRPF40B-211ENST00000551063 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 TMEM89A2RUT3 159 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 HSMCR30P0CW71 290 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 KCNJ3P48549 501 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 COMPP49747 757 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 PAX5Q02548 391 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 SCN1BQ07699 218 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 INSL4Q14641 139 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 PIGYQ3MUY2 71 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 OSR2Q8N2R0 312 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 MUL1Q969V5 352 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 IFT22Q9H7X7 185 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 TCF7L1Q9HCS4 588 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 ZNRD1Q9P1U0 126 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 ST3GAL6Q9Y274 331 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 MRPS28Q9Y2Q9 187 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
PRPF40B-211ENST00000551063 TRGV10A0A0A0MS01 117 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 A0A1W2PRD5 423 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 A0A1W2PRF3 423 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 A0A1W2PRM7 423 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 ODAMA1E959 279 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 CLPXO76031 633 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 PAHP00439 452 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 UCHL1P09936 223 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 IGHV1-8P0DP01 117 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 GTF2F2P13984 249 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 CPEP16870 476 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 SERPINA2P20848 420 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 COX7A1P24310 79 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 MAP2K4P45985 399 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 SLC22A6Q4U2R8 563 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 HSD17B12Q53GQ0 312 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 AWAT2Q6E213 333 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 GLIPR1L1Q6UWM5 242 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 ZNF782Q6ZMW2 699 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 PNKDQ8N490 385 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 OR13D1Q8NGV5 346 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 CORO2AQ92828 525 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 GCDHQ92947 438 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 MRPS24Q96EL2 167 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 COQ2Q96H96 371 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 MGLLQ99685 303 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 YTHDF1Q9BYJ9 559 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 GAL3ST2Q9H3Q3 398 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 NCOR1P1Q9H4R4 102 aa12.57□□□□□ -0.4
PRPF40B-211ENST00000551063 TAS2R3Q9NYW6 316 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms