RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 NANOGP8Q6NSW7 305 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 KCTD18Q6PI47 426 aaPredicted RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 DPY19L2P2Q6ZN68 376 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 KRT74Q7RTS7 529 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 MRPL21Q7Z2W9 205 aaKnown RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 LHFPL4Q7Z7J7 247 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 DHDDSQ86SQ9 333 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 ADCK1Q86TW2 530 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 MKXQ8IYA7 352 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OFCC1Q8IZS5 231 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 CYB561A3Q8NBI2 242 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR5AU1Q8NGC0 362 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR5T2Q8NGG2 359 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR56B2PQ8NGI1 322 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR5D13Q8NGL4 314 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR10Z1Q8NGY1 313 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR2AE1Q8NHA4 323 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 OR5K1Q8NHB7 308 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 LRRC29Q8WV35 223 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 MALSU1Q96EH3 234 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 NRBF2Q96F24 287 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF799Q96GE5 643 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 PRRC1Q96M27 445 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 RAB3IPQ96QF0 476 aaPredicted RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 ABHD1Q96SE0 405 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 PITX2Q99697 317 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 ATF6BQ99941 703 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 UQCC2Q9BRT2 126 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 FGF23Q9GZV9 251 aaPredicted RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 WDR13Q9H1Z4 485 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 HEXA-AS1Q9H8Q6 139 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 SEBOXQ9HB31 216 aaPredicted RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 MRPL22Q9NWU5 206 aaKnown RBP2.8□□□□□ -1.96
LIMA1-206ENST00000550611 HAO2Q9NYQ3 351 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 IL36RNQ9UBH0 155 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF222Q9UK12 451 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 IER3IP1Q9Y5U9 82 aa2.8□□□□□ -1.96
LIMA1-206ENST00000550611 IGKV1D-17A0A075B6S4 117 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 hCG_38984A0A1B0GV85 526 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 hCG_1809904A0A1W2PP81 198 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 A0A1W2PPE2 198 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 A0A1W2PR64 198 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 GGT3PA6NGU5 568 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 C17orf98A8MV24 154 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ODF3BA8MYP8 253 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 FXYD1O00168 92 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ARPC3O15145 178 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 MITFO75030 526 aaPredicted RBP2.79□□□□□ -1.96
LIMA1-206ENST00000550611 TSC22D2O75157 780 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ATP6V1G1O75348 118 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 IFNA14P01570 189 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 PSG2P11465 335 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 PSKH1P11801 424 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 BDKRB2P30411 391 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 GPR4P46093 362 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 YAP1P46937 504 aaKnown RBP2.79□□□□□ -1.96
LIMA1-206ENST00000550611 GSK3BP49841 420 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SLC25A1P53007 311 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 DLX6P56179 175 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 FAM3AP98173 230 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 BNIP1Q12981 228 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 CTF1Q16619 201 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SLC36A3Q495N2 470 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SMUG1Q53HV7 270 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 WDR73Q6P4I2 378 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ERICH5Q6P6B1 374 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 DRAM2Q6UX65 266 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 CCDC121Q6ZUS5 278 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 DPY19L4Q7Z388 723 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 TMEM219Q86XT9 240 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 CALHM1Q8IU99 346 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ZNRF1Q8ND25 227 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SDR9C7Q8NEX9 313 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 OR11H6Q8NGC7 330 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 OR8J3Q8NGG0 315 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ZNRF4Q8WWF5 429 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 H1FXQ92522 213 aaKnown RBP2.79□□□□□ -1.96
LIMA1-206ENST00000550611 MYDGFQ969H8 173 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SPTSSAQ969W0 71 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SGK3Q96BR1 496 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 TLCD1Q96CP7 247 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 SDSLQ96GA7 329 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 GRAMD2BQ96HH9 432 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 OR5M11Q96RB7 305 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 NMNAT3Q96T66 252 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 NKX3-1Q99801 234 aaPredicted RBP2.79□□□□□ -1.96
LIMA1-206ENST00000550611 FNDC11Q9BVV2 318 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 GPR61Q9BZJ8 451 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ANKRD19PQ9H560 264 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 RERGLQ9H628 205 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 OPA3Q9H6K4 179 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ELL3Q9HB65 397 aaPredicted RBP2.79□□□□□ -1.96
LIMA1-206ENST00000550611 MRGBPQ9NV56 204 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF319Q9P2F9 582 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 RHCGQ9UBD6 479 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF391Q9UJN7 358 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 RHBDD3Q9Y3P4 386 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 TSSC4Q9Y5U2 329 aaPredicted RBP2.79□□□□□ -1.96
LIMA1-206ENST00000550611 DNAH2Q9P225 4427 aa2.79□□□□□ -1.96
LIMA1-206ENST00000550611 IGHV4-28A0A0C4DH34 117 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms