RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TMEM33P57088 247 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 FLI1Q01543 452 aaPredicted RBP13.06□□□□□ -0.32
CUX1-214ENST00000550008 TMEM267Q0VDI3 215 aaPredicted RBP13.06□□□□□ -0.32
CUX1-214ENST00000550008 C1orf100Q5SVJ3 147 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 LINC00052Q96N35 136 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 RHOFQ9HBH0 211 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 PSENENQ9NZ42 101 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 ABCA1O95477 2261 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 HMSDA8MTL9 139 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 DFFBO76075 338 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 ZNF17P17021 662 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 EIF2S3P41091 472 aaKnown RBP13.06□□□□□ -0.32
CUX1-214ENST00000550008 SUCLG1P53597 346 aaKnown RBP13.06□□□□□ -0.32
CUX1-214ENST00000550008 PLAURQ03405 335 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 SMIM21Q3B7S5 101 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 RIMS4Q9H426 269 aaPredicted RBP13.06□□□□□ -0.32
CUX1-214ENST00000550008 PSG11Q9UQ72 335 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 A0A1W2PNV4 684 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 SCAF4O95104 1147 aaKnown RBP13.06□□□□□ -0.32
CUX1-214ENST00000550008 KITLGP21583 273 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 MPGP29372 298 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 MITD1Q8WV92 249 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 AKR1E2Q96JD6 320 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 SERTAD4Q9NUC0 356 aa13.06□□□□□ -0.32
CUX1-214ENST00000550008 FRMPD3Q5JV73 1810 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 CREBBPQ92793 2442 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 LRP5LA4QPB2 252 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 J3QRE1 110 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 PPYP01298 95 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 ISG15P05161 165 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
CUX1-214ENST00000550008 TIPARPQ7Z3E1 657 aaKnown RBP13.05□□□□□ -0.32
CUX1-214ENST00000550008 GAPTQ8N292 157 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 SLC25A40Q8TBP6 338 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 DOPEY2Q9Y3R5 2298 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 UMAD1C9J7I0 102 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 ZIC3O60481 467 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 ADIRFQ15847 76 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 FBXW9Q5XUX1 488 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
CUX1-214ENST00000550008 PRSS54Q6PEW0 395 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 LURAP1Q96LR2 239 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 TAAR3PQ9P1P4 343 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 PLXNA4Q9HCM2 1894 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 EFNA2O43921 213 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 FTH1P19P0C7X4 201 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 BPIFCQ8NFQ6 507 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 ERGIC1Q969X5 290 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 CACNG5Q9UF02 275 aa13.05□□□□□ -0.32
CUX1-214ENST00000550008 METTL15P1P0C7V9 234 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 MIDNQ504T8 468 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 HIPK2Q9H2X6 1198 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
CUX1-214ENST00000550008 DOCK10Q96BY6 2186 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 M0R1X1 148 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 HBE1P02100 147 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 UNC119Q13432 240 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 TBC1D26Q86UD7 250 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 OR13G1Q8NGZ3 307 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 FAM131CQ96AQ9 280 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 LRRC30A6NM36 301 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 ZNF891A8MT65 544 aaPredicted RBP13.04□□□□□ -0.32
CUX1-214ENST00000550008 NPIPB7O75200 414 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 WISP1O95388 367 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 OR2B8PP59922 312 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 RPP30P78346 268 aaKnown RBP13.04□□□□□ -0.32
CUX1-214ENST00000550008 BTNL3Q6UXE8 466 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 SLC35G3Q8N808 338 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 A0A0U1RQV5 110 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 Q3ZCU0 254 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 AVPI1Q5T686 147 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 OR2A2Q6IF42 318 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 LHX4Q969G2 390 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 IMMP1LQ96LU5 166 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 TMEM68Q96MH6 324 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 RASL12Q9NYN1 266 aa13.04□□□□□ -0.32
CUX1-214ENST00000550008 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 TMEM30CPA0ZSE6 113 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 DNPH1O43598 174 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 NPBWR2P48146 333 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 GNG10P50151 68 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 TAS2R30P59541 319 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 ADGRG7Q96K78 797 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 ARV1Q9H2C2 271 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 TSTD3H0UI37 97 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 SYNGR1O43759 233 aa13.03□□□□□ -0.32
CUX1-214ENST00000550008 CTSDP07339 412 aaPredicted RBP13.03□□□□□ -0.32
CUX1-214ENST00000550008 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms