RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
GPN3-206ENST00000549963 BARHL1Q9BZE3 327 aa12.32□□□□□ -0.44
GPN3-206ENST00000549963 PPIL3Q9H2H8 161 aaKnown RBP12.32□□□□□ -0.44
GPN3-206ENST00000549963 ZNF696Q9H7X3 374 aa12.32□□□□□ -0.44
GPN3-206ENST00000549963 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
GPN3-206ENST00000549963 C19orf12Q9NSK7 152 aa12.32□□□□□ -0.44
GPN3-206ENST00000549963 STUB1Q9UNE7 303 aa12.32□□□□□ -0.44
GPN3-206ENST00000549963 AK6Q9Y3D8 172 aaKnown RBP12.32□□□□□ -0.44
GPN3-206ENST00000549963 A0A0A6YYJ9 748 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 SLC33A1O00400 549 aaPredicted RBP12.31□□□□□ -0.44
GPN3-206ENST00000549963 TCF21O43680 179 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 PSPNO60542 156 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
GPN3-206ENST00000549963 FSHBP01225 129 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 CSN2P05814 226 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 MMP9P14780 707 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 OR3A1P47881 315 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 PIGYQ3MUY2 71 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 KCNG3Q8TAE7 436 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 LHX4Q969G2 390 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 JMJD8Q96S16 334 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 HEXA-AS1Q9H8Q6 139 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 V9GY05 133 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 NF1P21359 2839 aa12.31□□□□□ -0.44
GPN3-206ENST00000549963 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 TRGV10A0A0A0MS01 117 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A10PA6NDY2 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A8PA6NJQ4 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A7PA6NKC0 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A23PA8MXZ1 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 GEMIN2O14893 280 aaKnown RBP12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 ZNF728P0DKX0 622 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 CD37P11049 281 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 MGMTP16455 207 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 PRTN3P24158 256 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
GPN3-206ENST00000549963 P2RX3P56373 397 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 RBM39Q14498 530 aaKnown RBP12.3□□□□□ -0.44
GPN3-206ENST00000549963 RAB11BQ15907 218 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 KLF17Q5JT82 389 aaPredicted RBP12.3□□□□□ -0.44
GPN3-206ENST00000549963 KRBOX4Q5JUW0 171 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 ATAD3CQ5T2N8 411 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 C22orf42Q6IC83 251 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 METAP1DQ6UB28 335 aaPredicted RBP12.3□□□□□ -0.44
GPN3-206ENST00000549963 LYPD6Q86Y78 171 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 IFT22Q9H7X7 185 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 UBE2J1Q9Y385 318 aaPredicted RBP12.3□□□□□ -0.44
GPN3-206ENST00000549963 LINC00312Q9Y6C7 94 aa12.3□□□□□ -0.44
GPN3-206ENST00000549963 IGHV3OR16-10A0A075B7F0 116 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 SLC17A2O00624 439 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 SLC22A1O15245 554 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 BPNT1O95861 308 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 IGHV4-38-2P0DP08 117 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 ARSBP15848 533 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 CD36P16671 472 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 RAB3BP20337 219 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 ERVFRD-1P60508 538 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 AESQ08117 197 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 TAF9Q16594 264 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 TPRA1Q86W33 373 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 Q8N7P7 452 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 SUMF2Q8NBJ7 301 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 NEK7Q8TDX7 302 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 ZNF714Q96N38 554 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 DPCDQ9BVM2 203 aaPredicted RBP12.29□□□□□ -0.44
GPN3-206ENST00000549963 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 BANF2Q9H503 90 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 UNKLQ9H9P5 680 aaKnown RBP12.29□□□□□ -0.44
GPN3-206ENST00000549963 SIRT7Q9NRC8 400 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 TXNL4BQ9NX01 149 aaKnown RBP12.29□□□□□ -0.44
GPN3-206ENST00000549963 OR6C3Q9NZP0 311 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 ZNF69Q9UC07 566 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 ZFHX3Q15911 3703 aa12.29□□□□□ -0.44
GPN3-206ENST00000549963 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
GPN3-206ENST00000549963 JMJD1CQ15652 2540 aa12.28□□□□□ -0.44
GPN3-206ENST00000549963 TRAV24A0A0B4J272 114 aa12.28□□□□□ -0.44
GPN3-206ENST00000549963 IGHV1-69DA0A0B4J2H0 117 aa12.28□□□□□ -0.44
GPN3-206ENST00000549963 HSPB6O14558 160 aa12.28□□□□□ -0.44
GPN3-206ENST00000549963 MPIG6BO95866 241 aa12.28□□□□□ -0.44
GPN3-206ENST00000549963 IGHV1-69P01742 117 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms