RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 FAM183BPQ6ZVS7 135 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 GALNT10Q86SR1 603 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 FUNDC1Q8IVP5 155 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 ITPRIPQ8IWB1 547 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 H1FOOQ8IZA3 346 aaPredicted RBP2.4□□□□□ -2.03
SNRPF-202ENST00000549580 YIPF6Q96EC8 236 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 WDR34Q96EX3 536 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 TMEM56Q96MV1 263 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 FAM210AQ96ND0 272 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 DERL3Q96Q80 235 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF426Q9BUY5 554 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 MFSD1Q9H3U5 465 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.03
SNRPF-202ENST00000549580 LINC00574Q9H8X3 128 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 RHOFQ9HBH0 211 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 CYTL1Q9NRR1 136 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 IMP3Q9NV31 184 aaKnown RBP2.4□□□□□ -2.03
SNRPF-202ENST00000549580 UBAP1Q9NZ09 502 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 RBM12B-AS1Q9P1G2 102 aa2.4□□□□□ -2.03
SNRPF-202ENST00000549580 TRAV8-2A0A0B4J237 113 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 PGPA6NDG6 321 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 A8MUU9 505 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 EFCAB9A8MZ26 197 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 H3BP45 60 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 J3QLI3 93 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 LIN7AO14910 233 aaPredicted RBP2.39□□□□□ -2.03
SNRPF-202ENST00000549580 GYG2O15488 501 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 CYTH3O43739 400 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 SYNGR1O43759 233 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 COX7A2P2O60397 106 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 ORM1P02763 201 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 PRB2P02812 416 aaPredicted RBP2.39□□□□□ -2.03
SNRPF-202ENST00000549580 AKR1C4P17516 323 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 M6PRP20645 277 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 ELK4P28324 431 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 DLX6P56179 175 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 FUT5Q11128 374 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 EXOC3L4Q17RC7 722 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 FAM45BPQ6NSW5 357 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 FA2HQ7L5A8 372 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 LINC00596Q86U02 117 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 MIR7-3HGQ8N6C7 128 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF709Q8N972 641 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 APCDD1LQ8NCL9 501 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 OR5H2Q8NGV7 314 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 CASTOR1Q8WTX7 329 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 YPEL4Q96NS1 127 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 ANAPC13Q9BS18 74 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 POMKQ9H5K3 350 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 IL37Q9NZH6 218 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 RWDD2AQ9UIY3 292 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF780BQ9Y6R6 833 aa2.39□□□□□ -2.03
SNRPF-202ENST00000549580 V9GYY5 206 aaPredicted RBP2.39□□□□□ -2.03
SNRPF-202ENST00000549580 SETD1AO15047 1707 aaKnown RBP2.39□□□□□ -2.03
SNRPF-202ENST00000549580 TRAV8-3A0A0A6YYJ7 113 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 MYBPHLA2RUH7 354 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 FTCDNL1E5RQL4 147 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 F5H5K5 113 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 RPL36A-HNRNPH2H7BZ11 118 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 PHYHO14832 338 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SLC31A1O15431 190 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 COCHO43405 550 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 PDCD6O75340 191 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 PSIP1O75475 530 aaKnown RBP2.38□□□□□ -2.03
SNRPF-202ENST00000549580 ADAP1O75689 374 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SEC11BP0C7V7 166 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF286BP0CG31 522 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SCGB1C2P0DMR2 95 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SPNP16150 400 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 F8A1P23610 371 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 NOS1P29475 1434 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 MPV17P39210 176 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 CBX5P45973 191 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 NUDT2P50583 147 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 RPL14P50914 215 aaKnown RBP2.38□□□□□ -2.03
SNRPF-202ENST00000549580 MED21Q13503 144 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 TTMPQ5BVD1 217 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 FAM162BQ5T6X4 162 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 GLYATQ6IB77 296 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 MED27Q6P2C8 311 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF773Q6PK81 442 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 CLEC18BQ6UXF7 455 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SLC13A5Q86YT5 568 aaPredicted RBP2.38□□□□□ -2.03
SNRPF-202ENST00000549580 ZDHHC22Q8N966 263 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 OR5L1Q8NGL2 311 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SCGB1C1Q8TD33 95 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 TWIST2Q8WVJ9 160 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 DNAJB3Q8WWF6 145 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 UGT2B28Q9BY64 529 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 YEATS2Q9ULM3 1422 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 ZNF835Q9Y2P0 537 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 SVILO95425 2214 aa2.38□□□□□ -2.03
SNRPF-202ENST00000549580 DYSFO75923 2080 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 FAM183AA6NL82 134 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 CEACAM18A8MTB9 384 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 GOLGA8KD6RF30 607 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.37□□□□□ -2.03
SNRPF-202ENST00000549580 GOLGA8MH3BSY2 632 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 GPR171O14626 319 aa2.37□□□□□ -2.03
SNRPF-202ENST00000549580 RGS5O15539 181 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms