RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 IL36RNQ9UBH0 155 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 HHLA2Q9UM44 414 aa10.26□□□□□ -0.77
PTCH1-218ENST00000548945 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 SH2D1BO14796 132 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 SLC16A6O15403 523 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 MITFO75030 526 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-218ENST00000548945 INMTO95050 263 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 CSN2P05814 226 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 LPLP06858 475 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 PRKACAP17612 351 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 BCL3P20749 454 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 CDK2P24941 298 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 LMO1P25800 156 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 DUSP1P28562 367 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 MTCP1P56278 107 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 ISL1P61371 349 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 ABCA11PQ4W5N1 156 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 LHFPL2Q6ZUX7 228 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 PRSS35Q8N3Z0 413 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 SPSB1Q96BD6 273 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 CNBD2Q96M20 576 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 TBX5Q99593 518 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 HMG20AQ9NP66 347 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 FAM118AQ9NWS6 357 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 PCDHGB5Q9Y5G0 923 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
PTCH1-218ENST00000548945 A0A087X0M5 115 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 IGKV1-9A0A0C4DH69 117 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 LOC100130705A0A1B0GUX0 176 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 A0A1B0GX30 115 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 H3BSH0 61 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 AMY1AP04745 511 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 AMY2AP04746 511 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 MYF6P23409 242 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 POU3F4P49335 361 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 PDZK1IP1Q13113 114 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 HLA-DRB5Q30154 266 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 PRAMEF5Q5TYX0 476 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 TMEM244Q5VVB8 128 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 FAM220AQ7Z4H9 259 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 CHST4Q8NCG5 386 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 OR10H4Q8NGA5 316 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 RFKQ969G6 155 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 ADAT3Q96EY9 351 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-218ENST00000548945 NR1H4Q96RI1 486 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-218ENST00000548945 COMMD4Q9H0A8 199 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 EXOSC4Q9NPD3 245 aaKnown RBP10.24□□□□□ -0.77
PTCH1-218ENST00000548945 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
PTCH1-218ENST00000548945 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 ODAMA1E959 279 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 BUB1B-PAK6H3BSN5 160 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 SIRPB1O00241 398 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 TOR1AO14656 332 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 OR2H2O95918 312 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 MT-ND2P03891 347 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 ISG15P05161 165 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 ATF1P18846 271 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 CD24P25063 80 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 SLC6A1P30531 599 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 ATP6V1E1P36543 226 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 MNDAP41218 407 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 PTGFRP43088 359 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 KIR3DL2P43630 455 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 PRRX1P54821 245 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 KRTAP10-11P60412 298 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 FDX2Q6P4F2 183 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 KCTD20Q7Z5Y7 419 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 SAXO1Q8IYX7 474 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 C8orf59Q8N0T1 100 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-218ENST00000548945 OSR2Q8N2R0 312 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 SETD9Q8NE22 299 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 OR4D6Q8NGJ1 314 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 OR8J1Q8NGP2 316 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-218ENST00000548945 OPALINQ96PE5 141 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 GMPPBQ9Y5P6 360 aa10.23□□□□□ -0.77
PTCH1-218ENST00000548945 WI2-2373I1.2A0A1W2PRP0 233 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 E9PQ18 207 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 KDM4BO94953 1096 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 GNAO1P09471 354 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 ZNF20P17024 532 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 GLIPR1P48060 266 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 AESQ08117 197 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 DCTN2Q13561 401 aaKnown RBP10.22□□□□□ -0.77
PTCH1-218ENST00000548945 TPTE2P1Q5T6R2 138 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 ZNF691Q5VV52 312 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 BAIAP2L2Q6UXY1 529 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 THNSL2Q86YJ6 484 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 RDH10Q8IZV5 341 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 OR51D1Q8NGF3 324 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 OR2G2Q8NGZ5 317 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 DPF1Q92782 380 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 HRASLS5Q96KN8 279 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 ZNF286AQ9HBT8 521 aa10.22□□□□□ -0.77
PTCH1-218ENST00000548945 OR6C3Q9NZP0 311 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms