RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CCDC126Q96EE4 140 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 SNF8Q96H20 258 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 P2RX4Q99571 388 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 AIF1LQ9BQI0 150 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 GOLPH3Q9H4A6 298 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 RPF2Q9H7B2 306 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 PARVBQ9HBI1 364 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 PRTFDC1Q9NRG1 225 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 FAM215AQ9Y5M1 114 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 MYLKQ15746 1914 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 ABCA12Q86UK0 2595 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 MYO18AQ92614 2054 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 AHCTF1Q8WYP5 2266 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 A0A096LNJ9 63 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 IGKV3D-11A0A0A0MRZ8 115 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 KBTBD11-OT1A0A1B0GTJ5 212 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 GOLGA8KD6RF30 607 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 H0YHG0 523 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CDC7O00311 574 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 TP53I11O14683 189 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CD5LO43866 347 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 GLSO94925 669 aaPredicted RBP2.56□□□□□ -2
PTCH1-216ENST00000548379 CLIC3O95833 236 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 EPPINO95925 133 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 MBP02144 154 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 SERPINE2P07093 398 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 SERPINA6P08185 405 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 MYL2P10916 166 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 PTNP21246 168 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 DCKP27707 260 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 IMPA1P29218 277 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 RPL22P35268 128 aaKnown RBP2.56□□□□□ -2
PTCH1-216ENST00000548379 DNASE1L1P49184 302 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 AP1S2P56377 157 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 RAB38P57729 211 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 SELENBP1Q13228 472 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 BIKQ13323 160 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 MADCAM1Q13477 382 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CHRFAM7AQ494W8 412 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 BEX5Q5H9J7 111 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 DUPD1Q68J44 220 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 ZNF470Q6ECI4 717 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 OR52W1Q6IF63 320 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 ANKRD26P1Q6NSI1 321 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 AGTRAPQ6RW13 159 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CPNE9Q8IYJ1 553 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CA13Q8N1Q1 262 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 ZNF786Q8N393 782 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 MREGQ8N565 214 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 Q8N976 141 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 APCDD1LQ8NCL9 501 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CCDC54Q8NEL0 328 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 PROKR2Q8NFJ6 384 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CIDECQ96AQ7 238 aaPredicted RBP2.56□□□□□ -2
PTCH1-216ENST00000548379 CERS2Q96G23 380 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CAPZA3Q96KX2 299 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 ZFP3Q96NJ6 502 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 BIRC8Q96P09 236 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 SLC29A1Q99808 456 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 HDHD3Q9BSH5 251 aaPredicted RBP2.56□□□□□ -2
PTCH1-216ENST00000548379 DOHHQ9BU89 302 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 MED18Q9BUE0 208 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 KIFC1Q9BW19 673 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 SFXN3Q9BWM7 321 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 OR8D2Q9GZM6 311 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 PLEKHF2Q9H8W4 249 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 TMEM165Q9HC07 324 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 TREX1Q9NSU2 369 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 TAS2R13Q9NYV9 303 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 CLN8Q9UBY8 286 aa2.56□□□□□ -2
PTCH1-216ENST00000548379 IGLV11-55A0A075B6I3 123 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 TRBV9A0A0B4J1U6 114 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 LOC100506127A0A0U1RQW1 187 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 SIRPB1O00241 398 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 AIM2O14862 343 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 PPP1R2P9O14990 202 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ERI3O43414 337 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 CTNSO60931 367 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 AIFM1O95831 613 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 UBCP0CG48 685 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 CCL3P10147 92 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 NF1P21359 2839 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 MRPL19P49406 292 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 CCNG1P51959 295 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ATP5J2P56134 94 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 CLDN18P56856 261 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 NUTF2P61970 127 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 CRADDP78560 199 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ADARB1P78563 741 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 MXD1Q05195 221 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 SPTAN1Q13813 2472 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 CLINT1Q14677 625 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 FAM83EQ2M2I3 478 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 Q3ZCU0 254 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 TSPO2Q5TGU0 170 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 REEP3Q6NUK4 255 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 CYHR1Q6ZMK1 362 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 TEX43Q6ZNM6 134 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ZNF493Q6ZR52 646 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms