RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 C9orf139Q6ZV77 190 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 OR4S1Q8NGB4 309 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 SLC25A28Q96A46 364 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 TBX15Q96SF7 602 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 GFI1Q99684 422 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 NKX3-1Q99801 234 aaPredicted RBP11.91□□□□□ -0.5
DDX54-203ENST00000546869 CST11Q9H112 138 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 TXNL4BQ9NX01 149 aaKnown RBP11.91□□□□□ -0.5
DDX54-203ENST00000546869 NUP50Q9UKX7 468 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 V9GY05 133 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 NAV3Q8IVL0 2385 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 SVEP1Q4LDE5 3571 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 ZFHX3Q15911 3703 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 A0A1W2PQ09 198 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 hADV38S2A0JD32 116 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 SIRPB1O00241 398 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 RBP4P02753 201 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 SERPINA2P20848 420 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 PRTN3P24158 256 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
DDX54-203ENST00000546869 BLMHQ13867 455 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 PIGYQ3MUY2 71 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 TPRA1Q86W33 373 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 C11orf42Q8N5U0 333 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 Q8N7P7 452 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 CORO2AQ92828 525 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 METTL8Q9H825 291 aaKnown RBP11.9□□□□□ -0.5
DDX54-203ENST00000546869 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 SSR3Q9UNL2 185 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.5
DDX54-203ENST00000546869 WNK2Q9Y3S1 2297 aa11.9□□□□□ -0.5
DDX54-203ENST00000546869 hCG_1809904A0A1W2PP81 198 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 A0A1W2PPE2 198 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 A0A1W2PR64 198 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 A0A1W2PRV1 198 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 C17orf98A8MV24 154 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 BPNT1O95861 308 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 GLAP06280 429 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 MGMTP16455 207 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 CD36P16671 472 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 MYL9P24844 172 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 FPR2P25090 351 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 P2RX3P56373 397 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 QRFPP83859 136 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 SCN1BQ07699 218 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 KRTAP21-3Q3LHN1 58 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 C22orf42Q6IC83 251 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 USP43Q70EL4 1123 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 FAM185AQ8N0U4 392 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 TNFRSF14Q92956 283 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 PCGF1Q9BSM1 259 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 BARHL1Q9BZE3 327 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 FBLN5Q9UBX5 448 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 LINC00312Q9Y6C7 94 aa11.89□□□□□ -0.51
DDX54-203ENST00000546869 A0A0A6YYJ9 748 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 CENPVL3A0A0U1RRI6 287 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 A0A1W2PP11 408 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 GEMIN2O14893 280 aaKnown RBP11.88□□□□□ -0.51
DDX54-203ENST00000546869 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
DDX54-203ENST00000546869 EPHA1P21709 976 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 DLX6P56179 175 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 EDDM3BP56851 147 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 TIMM50Q3ZCQ8 353 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 GPR157Q5UAW9 335 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 VMO1Q7Z5L0 202 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 TMEM104Q8NE00 496 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 OR4M1Q8NGD0 313 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 Q96M66 194 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 CHST6Q9GZX3 395 aa11.88□□□□□ -0.51
DDX54-203ENST00000546869 RCC2Q9P258 522 aaKnown RBP11.88□□□□□ -0.51
DDX54-203ENST00000546869 UBE2J1Q9Y385 318 aaPredicted RBP11.88□□□□□ -0.51
DDX54-203ENST00000546869 IFITM5A6NNB3 132 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 OR7C1O76099 320 aaPredicted RBP11.87□□□□□ -0.51
DDX54-203ENST00000546869 ZNF728P0DKX0 622 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 ARSBP15848 533 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 RAB3BP20337 219 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
DDX54-203ENST00000546869 GUCA2AQ02747 115 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 AESQ08117 197 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 ZNF273Q14593 569 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 TAF9Q16594 264 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 PAN3Q58A45 887 aaKnown RBP11.87□□□□□ -0.51
DDX54-203ENST00000546869 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 SUMF2Q8NBJ7 301 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 YIPF6Q96EC8 236 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 COQ2Q96H96 371 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 KCTD7Q96MP8 289 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 DPCDQ9BVM2 203 aaPredicted RBP11.87□□□□□ -0.51
DDX54-203ENST00000546869 TM2D1Q9BX74 207 aa11.87□□□□□ -0.51
DDX54-203ENST00000546869 SELENOIQ9C0D9 397 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms