RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 CCDC182A6NF36 153 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 AP4M1O00189 453 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 CCRL2O00421 344 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 HMGN1P05114 100 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 HCKP08631 526 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 PRKACAP17612 351 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 BCL3P20749 454 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 ATP6V1B2P21281 511 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 NFYBP25208 207 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 PRDX6P30041 224 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 PTGFRP43088 359 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 INSL3P51460 131 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 FOXE3Q13461 319 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 GPR50Q13585 617 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 PLEKHG7Q6ZR37 379 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 HDXQ7Z353 690 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 RNF152Q8N8N0 203 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 C4orf3Q8WVX3 66 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 HRASLS5Q96KN8 279 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 MOB1AQ9H8S9 216 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 TMEM14AQ9Y6G1 99 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 R4GMQ9 66 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
SCAF11-208ENST00000546534 ODAMA1E959 279 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 FUOMA2VDF0 154 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 H3BSH0 61 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 OR2H2O95918 312 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 IGKV1D-33P01593 117 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 IGKV1-33P01594 117 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 IGHV3-7P01780 117 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 ELANEP08246 267 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 CCL1P22362 96 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 VAMP1P23763 118 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 GPR12P47775 334 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 CDC42P60953 191 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 CDK5Q00535 292 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 ODF4Q2M2E3 257 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 SPIN3Q5JUX0 258 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 ZNF322Q6U7Q0 402 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-208ENST00000546534 PGAM4Q8N0Y7 254 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 OR11H1Q8NG94 326 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 GIPC3Q8TF64 312 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 LEAP2Q969E1 77 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 BORCS8Q96FH0 119 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 GON7Q9BXV9 100 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 EDA2RQ9HAV5 297 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 PLEKHA1Q9HB21 404 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 ING3Q9NXR8 418 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 AMMECR1Q9Y4X0 333 aaPredicted RBP9.94□□□□□ -0.82
SCAF11-208ENST00000546534 HYDINQ4G0P3 5121 aa9.94□□□□□ -0.82
SCAF11-208ENST00000546534 TCRBV5S2A0A599 114 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 J3QR06 171 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 SH2D1BO14796 132 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 POU3F4P49335 361 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 CXCR4P61073 352 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 KIAA2026Q5HYC2 2103 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 FAM27D1Q5T7N8 215 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 TMEM236Q5W0B7 351 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 C16orf89Q6UX73 402 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 ISOC1Q96CN7 298 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 RNFT2Q96EX2 444 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 COQ2Q96H96 371 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 KIRREL1Q96J84 757 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 CHST5Q9GZS9 411 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 ABCG5Q9H222 651 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 CCDC134Q9H6E4 229 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 HMG20AQ9NP66 347 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 EXOSC4Q9NPD3 245 aaKnown RBP9.93□□□□□ -0.82
SCAF11-208ENST00000546534 GSTK1Q9Y2Q3 226 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 SNX5Q9Y5X3 404 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 CSMD3Q7Z407 3707 aa9.93□□□□□ -0.82
SCAF11-208ENST00000546534 ZNF729A6NN14 1252 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-208ENST00000546534 NCBP2LA6PVI3 153 aaKnown RBP9.92□□□□□ -0.82
SCAF11-208ENST00000546534 GATBO75879 557 aaKnown RBP9.92□□□□□ -0.82
SCAF11-208ENST00000546534 IGHG4P01861 327 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 CGB3P0DN86 165 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 CGB7P0DN87 165 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 SPNP16150 400 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 RAB7AP51149 207 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 ACTR3P61158 418 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 MADCAM1Q13477 382 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 KRBOX4Q5JUW0 171 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 TGIF2LXQ8IUE1 241 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 OR8H3Q8N146 312 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 MAGIXQ9H6Y5 334 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 LIN7CQ9NUP9 197 aaKnown RBP9.92□□□□□ -0.82
SCAF11-208ENST00000546534 ACTR3BQ9P1U1 418 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 MRM2Q9UI43 246 aaKnown RBP9.92□□□□□ -0.82
SCAF11-208ENST00000546534 PSG11Q9UQ72 335 aa9.92□□□□□ -0.82
SCAF11-208ENST00000546534 SORL1Q92673 2214 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 KBTBD11-OT1A0A1B0GTJ5 212 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 TRIM64CA6NLI5 447 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 SYT7O43581 403 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 CYB5AP00167 134 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 OSMP13725 252 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 RBP2P50120 134 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms