RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PXT1Q8NFP0 134 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 OR4D6Q8NGJ1 314 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 OR52I1Q8NGK6 324 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 STMN2Q93045 179 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 AKR1E2Q96JD6 320 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 RDH12Q96NR8 316 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 SPACA5Q96QH8 159 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 SLC29A1Q99808 456 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 ZNF702PQ9H963 129 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 ISG20L2Q9H9L3 353 aaKnown RBP7.55□□□□□ -1.2
YBX3-218ENST00000546298 FAM118AQ9NWS6 357 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 OR6C3Q9NZP0 311 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 FOXJ3Q9UPW0 622 aa7.55□□□□□ -1.2
YBX3-218ENST00000546298 A0A0G2JK05 382 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 ODAMA1E959 279 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 MEGF11A6BM72 1044 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 ZNF729A6NN14 1252 aaPredicted RBP7.54□□□□□ -1.2
YBX3-218ENST00000546298 FAM90A22PA8MWA6 464 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 FBXO24O75426 580 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 BAG2O95816 211 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 OPN1MWP04001 364 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 OPN1MW2P0DN77 364 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 OPN1MW3P0DN78 364 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 CDK2P24941 298 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 DCKP27707 260 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 PTGFRP43088 359 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 GLIPR1P48060 266 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 AESQ08117 197 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 MED21Q13503 144 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 KRBOX4Q5JUW0 171 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 ELP2Q6IA86 826 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 Q6P435 159 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 RPL22L1Q6P5R6 122 aaKnown RBP7.54□□□□□ -1.2
YBX3-218ENST00000546298 C16orf82Q7Z2V1 217 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 TMEM219Q86XT9 240 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 C11orf44Q8N8P7 122 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 OR4P4Q8NGL7 312 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 GPER1Q99527 375 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 PDCD1LG2Q9BQ51 273 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 JAM3Q9BX67 310 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 BARHL1Q9BZE3 327 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 NCOR1P1Q9H4R4 102 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 SMPD3Q9NY59 655 aaPredicted RBP7.54□□□□□ -1.2
YBX3-218ENST00000546298 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.54□□□□□ -1.2
YBX3-218ENST00000546298 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
YBX3-218ENST00000546298 OOSP1A8MZH6 123 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 E9PI62 339 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 SLC33A1O00400 549 aaPredicted RBP7.53□□□□□ -1.2
YBX3-218ENST00000546298 MMP23AO75900 390 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 MYL12AP19105 171 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 CD34P28906 385 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 MNDAP41218 407 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 KCNJ3P48549 501 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 ZP1P60852 638 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 PPP3R1P63098 170 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 IL13RA2Q14627 380 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 RSU1Q15404 277 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 LDLRAD2Q5SZI1 272 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 PRAMEF5Q5TYX0 476 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 CCDC144NLQ6NUI1 221 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 SATL1Q86VE3 508 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 NDUFA11Q86Y39 141 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 OR4F17Q8NGA8 305 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 TNFAIP8L1Q8WVP5 186 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 OR4F4Q96R69 305 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 S100A13Q99584 98 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 ZNF649Q9BS31 505 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 LIN7BQ9HAP6 207 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 FGF20Q9NP95 211 aaPredicted RBP7.53□□□□□ -1.2
YBX3-218ENST00000546298 C8orf4Q9NR00 106 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 SERTAD4Q9NUC0 356 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 CHCHD3Q9NX63 227 aaKnown RBP7.53□□□□□ -1.2
YBX3-218ENST00000546298 ING3Q9NXR8 418 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 ANK2Q01484 3957 aa7.53□□□□□ -1.2
YBX3-218ENST00000546298 MEIKINA0A087WXM9 373 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 A0A087X0M5 115 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 KBTBD11-OT1A0A1B0GTJ5 212 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 A0A1B0GX30 115 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 H0YJX3 145 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 M0QZK8 103 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 XPNPEP2O43895 674 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 LIMS3P0CW19 117 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 LIMS4P0CW20 117 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 C21orf33P30042 268 aaPredicted RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 VDAC2P45880 294 aaPredicted RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 SOX2P48431 317 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 BLCAPP62952 87 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 ATXN7L3Q14CW9 347 aaPredicted RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 CDK5R1Q15078 307 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 HLA-DRB5Q30154 266 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 PAN3Q58A45 887 aaKnown RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 TTC23Q5W5X9 447 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 ZNF529Q6P280 563 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 RNF144BQ7Z419 303 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 SETD9Q8NE22 299 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 OR51T1Q8NGJ9 327 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 OR9G1Q8NH87 305 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms