RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 A0A1W2PRV1 198 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 hADV38S2A0JD32 116 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 M0R1W7 72 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 HSPB6O14558 160 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 GEMIN2O14893 280 aaKnown RBP13.84□□□□□ -0.19
LTBR-215ENST00000546296 FSHBP01225 129 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 IGHV4-38-2P0DP08 117 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 MMP9P14780 707 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 CD36P16671 472 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 HTR2CP28335 458 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 MEF2CQ06413 473 aaPredicted RBP13.84□□□□□ -0.19
LTBR-215ENST00000546296 RAB11BQ15907 218 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 NHLRC3Q5JS37 347 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 C1orf122Q6ZSJ8 110 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 LINC00596Q86U02 117 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 BPIFB2Q8N4F0 458 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 TPRX1Q8N7U7 411 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 OR6M1Q8NGM8 313 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 C22orf15Q8WYQ4 148 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 FAM46BQ96A09 425 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 SELENOIQ9C0D9 397 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 MS4A7Q9GZW8 240 aaPredicted RBP13.84□□□□□ -0.19
LTBR-215ENST00000546296 CST11Q9H112 138 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 DOCK11Q5JSL3 2073 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 MEX3AA1L020 520 aaKnown RBP13.83□□□□□ -0.2
LTBR-215ENST00000546296 SLC22A1O15245 554 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 MGMTP16455 207 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 RANBP1P43487 201 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 P2RX3P56373 397 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 AESQ08117 197 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 P2RY14Q15391 338 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 TAF9Q16594 264 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 MPV17LQ2QL34 196 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 ATAD3CQ5T2N8 411 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 TRAPPC6BQ86SZ2 158 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 PDZD9Q8IXQ8 264 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 Q8N7P7 452 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 TMEM104Q8NE00 496 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 OR51E2Q9H255 320 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 METTL8Q9H825 291 aaKnown RBP13.83□□□□□ -0.2
LTBR-215ENST00000546296 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 TXNL4BQ9NX01 149 aaKnown RBP13.83□□□□□ -0.2
LTBR-215ENST00000546296 ZNF69Q9UC07 566 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 V9GY05 133 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 JMJD1CQ15652 2540 aa13.83□□□□□ -0.2
LTBR-215ENST00000546296 TRAV24A0A0B4J272 114 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 LOC100506127A0A0U1RQW1 187 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 SLC17A2O00624 439 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 MPIG6BO95866 241 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 CD37P11049 281 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 CCL3L1P16619 93 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 ERP29P30040 261 aaKnown RBP13.82□□□□□ -0.2
LTBR-215ENST00000546296 FGF9P31371 208 aaPredicted RBP13.82□□□□□ -0.2
LTBR-215ENST00000546296 ZNF273Q14593 569 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 ATXN7L3Q14CW9 347 aaPredicted RBP13.82□□□□□ -0.2
LTBR-215ENST00000546296 KRBOX4Q5JUW0 171 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 PRIMA1Q86XR5 153 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 SUMF2Q8NBJ7 301 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 C1orf147Q96MC9 270 aaPredicted RBP13.82□□□□□ -0.2
LTBR-215ENST00000546296 GFI1Q99684 422 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 CHCHD6Q9BRQ6 235 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 DPCDQ9BVM2 203 aaPredicted RBP13.82□□□□□ -0.2
LTBR-215ENST00000546296 BARHL1Q9BZE3 327 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 C2CD3Q4AC94 2353 aa13.82□□□□□ -0.2
LTBR-215ENST00000546296 TRGV10A0A0A0MS01 117 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 CENPVL3A0A0U1RRI6 287 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 BPNT1O95861 308 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 ZNF728P0DKX0 622 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 ARSBP15848 533 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 RAB3BP20337 219 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 PRTN3P24158 256 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 GADD45AP24522 165 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 GLIPR1P48060 266 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
LTBR-215ENST00000546296 NCR3LG1Q68D85 454 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 OR10K2Q6IF99 312 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 BRICD5Q6PL45 260 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 METAP1DQ6UB28 335 aaPredicted RBP13.81□□□□□ -0.2
LTBR-215ENST00000546296 BRD3OSQ6XYD6 125 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 KCNG3Q8TAE7 436 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 NEK7Q8TDX7 302 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
LTBR-215ENST00000546296 SLC6A7Q99884 636 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 IFT22Q9H7X7 185 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 SPACA1Q9HBV2 294 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 ZNF581Q9P0T4 197 aa13.81□□□□□ -0.2
LTBR-215ENST00000546296 NAV3Q8IVL0 2385 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 IGHV1-69DA0A0B4J2H0 117 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 ODAMA1E959 279 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 H3BUI4 141 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 IGHV1-69P01742 117 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 CSN2P05814 226 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 VSIG8P0DPA2 414 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 JUNBP17275 347 aaPredicted RBP13.8□□□□□ -0.2
LTBR-215ENST00000546296 KCNJ3P48549 501 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 DLX1P56177 255 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 BPIFB3P59826 476 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 GUCA2AQ02747 115 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 HES5Q5TA89 166 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms