RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 CDK2P24941 298 aa18.28■□□□□ 0.52
CHD4-214ENST00000545942 ZP1P60852 638 aa18.28■□□□□ 0.52
CHD4-214ENST00000545942 KLHL22Q53GT1 634 aa18.28■□□□□ 0.52
CHD4-214ENST00000545942 Q6P435 159 aa18.28■□□□□ 0.52
CHD4-214ENST00000545942 NOTCH1P46531 2555 aa18.28■□□□□ 0.52
CHD4-214ENST00000545942 ODAMA1E959 279 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 OPN1MWP04001 364 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 OPN1MW2P0DN77 364 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 OPN1MW3P0DN78 364 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 C1QL4Q86Z23 238 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 ZNF596Q8TC21 504 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 CPNE2Q96FN4 548 aaPredicted RBP18.27■□□□□ 0.52
CHD4-214ENST00000545942 DPM3Q9P2X0 92 aa18.27■□□□□ 0.52
CHD4-214ENST00000545942 FAM90A22PA8MWA6 464 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 SLC33A1O00400 549 aaPredicted RBP18.26■□□□□ 0.51
CHD4-214ENST00000545942 DEGS1O15121 323 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 FBXO24O75426 580 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 BDH1Q02338 343 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 CDK5R1Q15078 307 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 KRBOX4Q5JUW0 171 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 ZNF691Q5VV52 312 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 BAIAP2L2Q6UXY1 529 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 APH1BQ8WW43 257 aa18.26■□□□□ 0.51
CHD4-214ENST00000545942 PEX14O75381 377 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 RAB3AP20336 220 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 PTGFRP43088 359 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 MTNR1BP49286 362 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 ATXN7L3Q14CW9 347 aaPredicted RBP18.25■□□□□ 0.51
CHD4-214ENST00000545942 ARSJQ5FYB0 599 aaPredicted RBP18.25■□□□□ 0.51
CHD4-214ENST00000545942 OR4D6Q8NGJ1 314 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 COQ2Q96H96 371 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 ING3Q9NXR8 418 aa18.25■□□□□ 0.51
CHD4-214ENST00000545942 EBAG9O00559 213 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 MAGEB3O15480 346 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 IGLV1-47P01700 117 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 ALDOBP05062 364 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 LIMS3P0CW19 117 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 LIMS4P0CW20 117 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 CD34P28906 385 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 ARHGDIBP52566 201 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 GTF2A1P52655 376 aaPredicted RBP18.24■□□□□ 0.51
CHD4-214ENST00000545942 BLCAPP62952 87 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 LPCAT4Q643R3 524 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 ELP2Q6IA86 826 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 ZNF529Q6P280 563 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 ZNF555Q8NEP9 628 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 PXT1Q8NFP0 134 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 JAM3Q9BX67 310 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 WNT10AQ9GZT5 417 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 OR6C3Q9NZP0 311 aa18.24■□□□□ 0.51
CHD4-214ENST00000545942 FAM172BPA6NC97 362 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 ZNF729A6NN14 1252 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 LEUTXA8MZ59 168 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 H0YJX3 145 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 CD28P10747 220 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 BRS3P32247 399 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 GDNFP39905 211 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 CCDC58Q4VC31 144 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 Q6ZS46 218 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 C16orf82Q7Z2V1 217 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 LYG1Q8N1E2 194 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 WIPF2Q8TF74 440 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 CREB3L1Q96BA8 519 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 AKR1E2Q96JD6 320 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 RDH12Q96NR8 316 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 OR5M11Q96RB7 305 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 NR1H4Q96RI1 486 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 GPER1Q99527 375 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 ZNF286AQ9HBT8 521 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 FGF20Q9NP95 211 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 SMPD3Q9NY59 655 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 TOR1AO14656 332 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 WBP4O75554 376 aaKnown RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 BAG2O95816 211 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 CD2P06729 351 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 CEACAM3P40198 252 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 VDAC2P45880 294 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 SOX2P48431 317 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 SMN1Q16637 294 aaKnown RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 NSUN5P1Q3KNT7 163 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 SATL1Q86VE3 508 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 OR51A2Q8NGJ7 313 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 OR51T1Q8NGJ9 327 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 GPR148Q8TDV2 347 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 TNFAIP8L1Q8WVP5 186 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 RGP1Q92546 391 aaPredicted RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 STMN2Q93045 179 aa18.23■□□□□ 0.51
CHD4-214ENST00000545942 PPIL3Q9H2H8 161 aaKnown RBP18.23■□□□□ 0.51
CHD4-214ENST00000545942 A0A087X0M5 115 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 A0A1B0GX30 115 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 GABRPO00591 440 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 HSPB6O14558 160 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 DCKP27707 260 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 PRRX1P54821 245 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 EMX1Q04741 257 aaPredicted RBP18.22■□□□□ 0.51
CHD4-214ENST00000545942 ZSCAN26Q16670 478 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 HLA-DRB5Q30154 266 aa18.22■□□□□ 0.51
CHD4-214ENST00000545942 PAN3Q58A45 887 aaKnown RBP18.22■□□□□ 0.51
CHD4-214ENST00000545942 RPL22L1Q6P5R6 122 aaKnown RBP18.22■□□□□ 0.51
CHD4-214ENST00000545942 NDUFA11Q86Y39 141 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms