RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 ATF1P18846 271 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 GABRR1P24046 479 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 CD24P25063 80 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 FASP25445 335 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 ATP6V1E1P36543 226 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 OR3A1P47881 315 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 POU3F4P49335 361 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 RBP2P50120 134 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 ATP1B3P54709 279 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 SNU13P55769 128 aaKnown RBP6.78□□□□□ -1.32
USP28-215ENST00000545608 ISL1P61371 349 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 CD83Q01151 205 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 ZNF146Q15072 292 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 TMEM177Q53S58 311 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 C1orf146Q5VVC0 180 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 LHFPL2Q6ZUX7 228 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 RNF144BQ7Z419 303 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 ENTHD1Q8IYW4 607 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 FAM58AQ8N1B3 248 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 CCDC54Q8NEL0 328 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 DNAAF1Q8NEP3 725 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 OR4F17Q8NGA8 305 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 OR4P4Q8NGL7 312 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 FGGYQ96C11 551 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 C10orf35Q96D05 121 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 OR4F4Q96R69 305 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 CLEC7AQ9BXN2 247 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 MRPS26Q9BYN8 205 aaKnown RBP6.78□□□□□ -1.32
USP28-215ENST00000545608 TMEM133Q9H2Q1 129 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 RIBC2Q9H4K1 309 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 GNG8Q9UK08 70 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 AP4S1Q9Y587 144 aa6.78□□□□□ -1.32
USP28-215ENST00000545608 IGKV1-12A0A0C4DH73 117 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 TRBV2A0A0J9YWF9 115 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 A0A1W2PRX2 142 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 SIRPB1O00241 398 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 MGST3O14880 152 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 PIN1P1O15428 100 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 PEX14O75381 377 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 TNFAIP8O95379 198 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 IGKV1D-12P01611 117 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 UBCP0CG48 685 aaKnown RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 PRKACAP17612 351 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 AZGP1P25311 298 aaKnown RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 HTR1DP28221 377 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 ERP29P30040 261 aaKnown RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 GDNFP39905 211 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 VDAC2P45880 294 aaPredicted RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 MTCP1P56278 107 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 P2RX3P56373 397 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 LOXL3P58215 753 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 NANOS3P60323 173 aaKnown RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 TCTEX1D4Q5JR98 221 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 PRAMEF5Q5TYX0 476 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 TMEM244Q5VVB8 128 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 UTS2BQ765I0 119 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 TRAPPC6BQ86SZ2 158 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 Q8IYB0 196 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 ABHD12Q8N2K0 398 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 ZBTB8BQ8NAP8 495 aaPredicted RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 OR5AU1Q8NGC0 362 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 OR8J1Q8NGP2 316 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 OR2G2Q8NGZ5 317 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 OR10AC1Q8NH08 325 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 PP6455Q8WZ26 134 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 SGCDQ92629 289 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 RFT1Q96AA3 541 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 PHF21AQ96BD5 680 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 OSBPL10Q9BXB5 764 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 GABARAPL3Q9BY60 117 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 HMG20AQ9NP66 347 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 NECAP2Q9NVZ3 263 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
USP28-215ENST00000545608 DPM3Q9P2X0 92 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 ENOPH1Q9UHY7 261 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 BLOC1S6Q9UL45 172 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 GSTK1Q9Y2Q3 226 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 U3KQE9 123 aa6.77□□□□□ -1.33
USP28-215ENST00000545608 FAM172BPA6NC97 362 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 CCDC160A6NGH7 325 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 OR2H2O95918 312 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 CYB5AP00167 134 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 IGLL1P15814 213 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 PRKACBP22694 351 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 CDK2P24941 298 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 GLIPR1P48060 266 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 AESQ08117 197 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 PDZK1IP1Q13113 114 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 UTF1Q5T230 341 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 ZBTB49Q6ZSB9 765 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 FAM220AQ7Z4H9 259 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 NRG4Q8WWG1 115 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 CORO2AQ92828 525 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 SPACA5Q96QH8 159 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 MBOAT4Q96T53 435 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 EXOSC4Q9NPD3 245 aaKnown RBP6.76□□□□□ -1.33
USP28-215ENST00000545608 GLS2Q9UI32 602 aa6.76□□□□□ -1.33
USP28-215ENST00000545608 RAB26Q9ULW5 256 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms