RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	HCP5	Q6MZN7	132 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	MKX	Q8IYA7	352 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR8H2	Q8N162	312 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	BATF2	Q8N1L9	274 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF676	Q8N7Q3	588 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ASCC1	Q8N9N2	400 aa	Known RBP	6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	BEND2	Q8NDZ0	799 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF555	Q8NEP9	628 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR51A4	Q8NGJ6	313 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR13C3	Q8NGS6	347 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR10AC1	Q8NH08	325 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	EMG1	Q92979	244 aa	Known RBP	6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	SLAMF9	Q96A28	289 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF649	Q9BS31	505 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	COMMD4	Q9H0A8	199 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF696	Q9H7X3	374 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	RHOF	Q9HBH0	211 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	BEX1	Q9HBH7	125 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	TNFRSF19	Q9NS68	423 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	C1RL	Q9NZP8	487 aa		6.25	□□□□□ -1.41
SNHG1-223	ENST00000545440	IRGM	A1A4Y4	181 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	CLPSL1	A2RUU4	121 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	C17orf98	A8MV24	154 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440		M0QYG6	137 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	WBP4	O75554	376 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	INMT	O95050	263 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	SCAF4	O95104	1147 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZFPL1	O95159	310 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	BAG2	O95816	211 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	HAND1	O96004	215 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OCM2	P0CE71	109 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OCM	P0CE72	109 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	CCL3L1	P16619	93 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	BCL3	P20749	454 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	GCSH	P23434	173 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OMG	P23515	440 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	DLX6	P56179	175 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	PDZK1IP1	Q13113	114 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF146	Q15072	292 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	AANAT	Q16613	207 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	KLHL22	Q53GT1	634 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF691	Q5VV52	312 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OLFML2A	Q68BL7	652 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	DHRS7B	Q6IAN0	325 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	C17orf107	Q6ZR85	190 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	GDPD3	Q7L5L3	318 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	LHFPL3	Q86UP9	236 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	SAXO1	Q8IYX7	474 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	FAM58A	Q8N1B3	248 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	PNKD	Q8N490	385 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	C11orf42	Q8N5U0	333 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	PARP16	Q8N5Y8	322 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	PACRGL	Q8N7B6	248 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR4M1	Q8NGD0	313 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR52I1	Q8NGK6	324 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR13C9	Q8NGT0	318 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	RPS4Y2	Q8TD47	263 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	TAF15	Q92804	592 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	FGGY	Q96C11	551 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	CPNE2	Q96FN4	548 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	SNX22	Q96L94	193 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	HEXA-AS1	Q9H8Q6	139 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	ISG20L2	Q9H9L3	353 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	NEK6	Q9HC98	313 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	AMBN	Q9NP70	447 aa		6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	FGF20	Q9NP95	211 aa	Predicted RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440	RBFOX1	Q9NWB1	397 aa	Known RBP	6.24	□□□□□ -1.41
SNHG1-223	ENST00000545440		A0A1W2PRD5	423 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440		A0A1W2PRF3	423 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440		A0A1W2PRM7	423 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	hADV38S2	A0JD32	116 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	SPRY1	O43609	319 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	SULT1B1	O43704	296 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	KDM4B	O94953	1096 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	LIMS3	P0CW19	117 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	LIMS4	P0CW20	117 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF728	P0DKX0	622 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	PIP	P12273	146 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	PRKACA	P17612	351 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	DCK	P27707	260 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	TGFBR2	P37173	567 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	NPBWR2	P48146	333 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	GBX2	P52951	348 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	EDDM3B	P56851	147 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	MEF2C	Q06413	473 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	IL18R1	Q13478	541 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	RCN1	Q15293	331 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	GRK1	Q15835	563 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	LRRC75B	Q2VPJ9	315 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	CCDC58	Q4VC31	144 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	TTC23	Q5W5X9	447 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	TCF23	Q7RTU1	214 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	SERPINA12	Q8IW75	414 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	SETD9	Q8NE22	299 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR5D14	Q8NGL3	314 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	OR5AK2	Q8NH90	309 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	TSEN15	Q8WW01	171 aa	Known RBP	6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	ZNF714	Q96N38	554 aa		6.23	□□□□□ -1.41
SNHG1-223	ENST00000545440	PDCD1LG2	Q9BQ51	273 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms