RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CXorf66Q5JRM2 361 aaPredicted RBP11.48□□□□□ -0.57
RTN3-214ENST00000545432 BCL2L15Q5TBC7 163 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 ZNF322Q6U7Q0 402 aaPredicted RBP11.48□□□□□ -0.57
RTN3-214ENST00000545432 TGIF2LXQ8IUE1 241 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 CCDC54Q8NEL0 328 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 OR4D6Q8NGJ1 314 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 GIPC3Q8TF64 312 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 TOMM40LQ969M1 308 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 C10orf35Q96D05 121 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 COQ2Q96H96 371 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 MNTQ99583 582 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 APOL4Q9BPW4 351 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 SLC25A19Q9HC21 320 aa11.48□□□□□ -0.57
RTN3-214ENST00000545432 LIN7CQ9NUP9 197 aaKnown RBP11.48□□□□□ -0.57
RTN3-214ENST00000545432 KBTBD11-OT1A0A1B0GTJ5 212 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 SH2D1BO14796 132 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 GATBO75879 557 aaKnown RBP11.47□□□□□ -0.57
RTN3-214ENST00000545432 SASH3O75995 380 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 HCKP08631 526 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 OSMP13725 252 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 BCL3P20749 454 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 PSMB8P28062 276 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 PTGFRP43088 359 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 ACTR3P61158 418 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 RPS7P62081 194 aaKnown RBP11.47□□□□□ -0.57
RTN3-214ENST00000545432 ASPHD1Q5U4P2 390 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 Q8N9W7 124 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 BORCS8Q96FH0 119 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 PLSCR3Q9NRY6 295 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 MRM2Q9UI43 246 aaKnown RBP11.47□□□□□ -0.57
RTN3-214ENST00000545432 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 AMMECR1Q9Y4X0 333 aaPredicted RBP11.47□□□□□ -0.57
RTN3-214ENST00000545432 HERC2O95714 4834 aa11.47□□□□□ -0.57
RTN3-214ENST00000545432 I3L521 148 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 MAGEB4O15481 346 aaPredicted RBP11.46□□□□□ -0.57
RTN3-214ENST00000545432 IGKV1D-33P01593 117 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 IGKV1-33P01594 117 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 Q6P435 159 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 CYP2R1Q6VVX0 501 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 SLC16A12Q6ZSM3 486 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 MEPCEQ7L2J0 689 aaKnown RBP11.46□□□□□ -0.57
RTN3-214ENST00000545432 OVCH2Q7RTZ1 564 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 HRASLS5Q96KN8 279 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 RHOFQ9HBH0 211 aa11.46□□□□□ -0.57
RTN3-214ENST00000545432 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.57
RTN3-214ENST00000545432 IGKV1-9A0A0C4DH69 117 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 A8MZ25 164 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 NPIPB11E5RHQ5 1161 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 SIRPB1O00241 398 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 INMTO95050 263 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 IGF1P05019 195 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 MRPL3P09001 348 aaKnown RBP11.45□□□□□ -0.58
RTN3-214ENST00000545432 PRKACAP17612 351 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 RBP2P50120 134 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 ATP1B3P54709 279 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 CXCR4P61073 352 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 EFNB1P98172 346 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 ZNF816Q0VGE8 651 aaPredicted RBP11.45□□□□□ -0.58
RTN3-214ENST00000545432 MADCAM1Q13477 382 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 HES1Q14469 280 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 RBM39Q14498 530 aaKnown RBP11.45□□□□□ -0.58
RTN3-214ENST00000545432 HNF4GQ14541 408 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 ADAMTSL5Q6ZMM2 481 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 TMEM179BQ7Z7N9 219 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 IZUMO1Q8IYV9 350 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 CHST4Q8NCG5 386 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 HAVCR2Q8TDQ0 301 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 EAF1Q96JC9 268 aaPredicted RBP11.45□□□□□ -0.58
RTN3-214ENST00000545432 CHCHD6Q9BRQ6 235 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 OR6C3Q9NZP0 311 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 PSG11Q9UQ72 335 aa11.45□□□□□ -0.58
RTN3-214ENST00000545432 IGKV1-12A0A0C4DH73 117 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 KDM4BO94953 1096 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 SERPINA3P01011 423 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 IGKV1D-12P01611 117 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
RTN3-214ENST00000545432 PAX5Q02548 391 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 PDZK1IP1Q13113 114 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 FAM27D1Q5T7N8 215 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 UTS2BQ765I0 119 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 PP6455Q8WZ26 134 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 RNFT2Q96EX2 444 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 UBE2E2Q96LR5 201 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
RTN3-214ENST00000545432 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
RTN3-214ENST00000545432 LDLRAD4O15165 306 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 SYT7O43581 403 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 MPZL2O60487 215 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 LY86O95711 162 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 CBX1P83916 185 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 KRBOX4Q5JUW0 171 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 TMEM236Q5W0B7 351 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 PLEKHG7Q6ZR37 379 aa11.43□□□□□ -0.58
RTN3-214ENST00000545432 ZNF491Q8N8L2 437 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms