RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	IGFL2	Q6UWQ7	119 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	KRTAP5-2	Q701N4	177 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	ZNF429	Q86V71	674 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	DEFB106A	Q8N104	65 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	LINC01555	Q8NAE3	123 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	LILRB4	Q8NHJ6	448 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	CCL4L1	Q8NHW4	92 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	SLC37A2	Q8TED4	501 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	PHF10	Q8WUB8	498 aa	Known RBP	2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	PDXP	Q96GD0	296 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	UBE2E2	Q96LR5	201 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	ZNF681	Q96N22	645 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	ZNF396	Q96N95	335 aa	Predicted RBP	2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	CHAC1	Q9BUX1	264 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	HINT2	Q9BX68	163 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	EDA2R	Q9HAV5	297 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	SLC17A7	Q9P2U7	560 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	OR12D3	Q9UGF7	316 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	TP53TG3	Q9ULZ0	132 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	NEU3	Q9UQ49	428 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	ACAN	P16112	2415 aa		2.72	□□□□□ -1.97
SNHG1-222	ENST00000545308	MXRA5	Q9NR99	2828 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	JMJD1C	Q15652	2540 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	FAM166B	A8MTA8	275 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	HACD1	B0YJ81	288 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	RFXANK	O14593	260 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	CA11	O75493	328 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	NPPA	P01160	153 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	UQCRH	P07919	91 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	CCL2	P13500	99 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	PFN2	P35080	140 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	HSPA9	P38646	679 aa	Known RBP	2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	PPP1R2	P41236	205 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	VSX2	P58304	361 aa	Predicted RBP	2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	CACNG7	P62955	275 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	PAFAH1B2	P68402	229 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	CKAP4	Q07065	602 aa	Known RBP	2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	TFDP2	Q14188	446 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	RWDD4	Q6NW29	188 aa	Known RBP	2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	PID1	Q7Z2X4	250 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	C11orf53	Q8IXP5	236 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	DNAAF3	Q8N9W5	541 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	WDR31	Q8NA23	367 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	LRRC20	Q8TCA0	184 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	BLOC1S5	Q8TDH9	187 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	ASZ1	Q8WWH4	475 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	RGP1	Q92546	391 aa	Predicted RBP	2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	RMND5B	Q96G75	393 aa	Predicted RBP	2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	RNF170	Q96K19	258 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	GPR21	Q99679	349 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	SPNS1	Q9H2V7	528 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	ARMC7	Q9H6L4	198 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	REEP1	Q9H902	201 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	PDF	Q9HBH1	243 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	ISYNA1	Q9NPH2	558 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZNF229	Q9UJW7	825 aa		2.71	□□□□□ -1.98
SNHG1-222	ENST00000545308	HIVEP2	P31629	2446 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	TET2	Q6N021	2002 aa	Predicted RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	FLNA	P21333	2647 aa	Known RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGHV3-74	A0A0B4J1X5	117 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308		A0A0B4J2E0	115 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	IGKV1-8	A0A0C4DH67	115 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	NKX2-6	A6NCS4	301 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	TLCD2	A6NGC4	264 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	SYCE1L	A8MT33	242 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308		E7EQ34	232 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	SLC16A7	O60669	478 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	GABARAP	O95166	117 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	VAPB	O95292	243 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	LCA5L	O95447	670 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR8U9	P0C7N5	309 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	GFAP	P14136	432 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	RAB3A	P20336	220 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	CCNO	P22674	350 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	HTR2C	P28335	458 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	SPAM1	P38567	509 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	MYCNOS	P40205	109 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	PPIC	P45877	212 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	CAPZB	P47756	277 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	CD151	P48509	253 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	P2RX1	P51575	399 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	WNT4	P56705	351 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	AP1S1	P61966	158 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	ARG2	P78540	354 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	DCD	P81605	110 aa	Known RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	DMTN	Q08495	405 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	ATP6V1F	Q16864	119 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	CHRFAM7A	Q494W8	412 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	OOSP2	Q86WS3	158 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	COX18	Q8N8Q8	333 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	TMEM35B	Q8NCS4	154 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	GPR26	Q8NDV2	337 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR10G4	Q8NGN3	311 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR2Y1	Q8NGV0	311 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR6K2	Q8NGY2	324 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	OR8U1	Q8NH10	309 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	ZFP90	Q8TF47	636 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	PATE1	Q8WXA2	126 aa		2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	SLIRP	Q9GZT3	109 aa	Known RBP	2.7	□□□□□ -1.98
SNHG1-222	ENST00000545308	RAB1B	Q9H0U4	201 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms