RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ODF4Q2M2E3 257 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 FDX2Q6P4F2 183 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 UNQ9370/PRO34162Q6UXP9 181 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 GDPD3Q7L5L3 318 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 OR2W3Q7Z3T1 314 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 ZNF555Q8NEP9 628 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 OR52I1Q8NGK6 324 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 TFAP2CQ92754 450 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 PELI1Q96FA3 418 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 SNX22Q96L94 193 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 PKIBQ9C010 78 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 GPR173Q9NS66 373 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 DPM3Q9P2X0 92 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 LOC107986453A0A1B0GWG9 222 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 hADV38S2A0JD32 116 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 PSMB11A5LHX3 300 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 ERICH4A6NGS2 130 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 A6NIN4 97 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 SNTNA6NMZ2 147 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 H3BSH0 61 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 BRS3P32247 399 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 BDH1Q02338 343 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 RAB40BQ12829 278 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 IL24Q13007 206 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 GALEQ14376 348 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 KLHL22Q53GT1 634 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 CLVS2Q5SYC1 327 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 BAIAP2L2Q6UXY1 529 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 FAM220AQ7Z4H9 259 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 ZNF329Q86UD4 541 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 LHFPL3Q86UP9 236 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 EGFL6Q8IUX8 553 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 TPRX1Q8N7U7 411 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 OR52N4Q8NGI2 321 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 OR2G2Q8NGZ5 317 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 CYGBQ8WWM9 190 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 C4orf36Q96KX1 117 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 Q96MT0 163 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 ALG8Q9BVK2 526 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 DCLRE1BQ9H816 532 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 ISG20L2Q9H9L3 353 aaKnown RBP10.14□□□□□ -0.79
USP28-212ENST00000544750 SEBOXQ9HB31 216 aaPredicted RBP10.14□□□□□ -0.79
USP28-212ENST00000544750 ERVK13-1Q9NX77 482 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 MTCH1Q9NZJ7 389 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 FRRS1LQ9P0K9 344 aa10.14□□□□□ -0.79
USP28-212ENST00000544750 GNAO1P09471 354 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 LIMS3P0CW19 117 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 LIMS4P0CW20 117 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 TTC23Q5W5X9 447 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 LAIR2Q6ISS4 152 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 KCTD20Q7Z5Y7 419 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 ANGPTL5Q86XS5 388 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 RDH10Q8IZV5 341 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 DHRSXQ8N5I4 330 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 OR10AC1Q8NH08 325 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 CAPSLQ8WWF8 208 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 NRG4Q8WWG1 115 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 PRR25Q96S07 402 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 ASCL2Q99929 193 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 ADI1Q9BV57 179 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 JAM3Q9BX67 310 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 FGF20Q9NP95 211 aaPredicted RBP10.13□□□□□ -0.79
USP28-212ENST00000544750 ZFP57Q9NU63 452 aa10.13□□□□□ -0.79
USP28-212ENST00000544750 GAR1Q9NY12 217 aaKnown RBP10.13□□□□□ -0.79
USP28-212ENST00000544750 RPL36Q9Y3U8 105 aaKnown RBP10.13□□□□□ -0.79
USP28-212ENST00000544750 FAM90A18PA6NE21 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A16PA6NEW6 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 OR4C45A6NMZ5 311 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A9PA6NNJ1 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 E9PI62 339 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 J3QLW9 94 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 M0QZK8 103 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 SYT7O43581 403 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 PSPNO60542 156 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FADS2O95864 444 aaKnown RBP10.12□□□□□ -0.79
USP28-212ENST00000544750 SNRNP70P08621 437 aaKnown RBP10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 UBCP0CG48 685 aaKnown RBP10.12□□□□□ -0.79
USP28-212ENST00000544750 ZNF19P17023 458 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 CHATP28329 748 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 CD34P28906 385 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 CAPGP40121 348 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 OR3A4PP47883 348 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 EDDM3AQ14507 147 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 RTN4RL2Q86UN3 420 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 SYS1Q8N2H4 156 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 ABHD12Q8N2K0 398 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 RAX2Q96IS3 184 aa10.12□□□□□ -0.79
USP28-212ENST00000544750 IGKV1-27A0A075B6S5 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms