RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 HLA-DQB1P01920 261 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 HPXP02790 462 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 LPLP06858 475 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 CD3GP09693 182 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 GSTT2BP0CG30 244 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 PPIAL4FP0DN26 164 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 DAOP14920 347 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 ZNF44P15621 663 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 INPP1P49441 399 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 TMEM33P57088 247 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 GNG2P59768 71 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 AP3S2P59780 193 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 ACTBP60709 375 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 ACTG1P63261 375 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 PLA2G7Q13093 441 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
YBX3-215ENST00000544504 PAN3Q58A45 887 aaKnown RBP7.98□□□□□ -1.13
YBX3-215ENST00000544504 ATAD3CQ5T2N8 411 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 TEX36Q5VZQ5 186 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 TRIQKQ629K1 86 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 C16orf87Q6PH81 154 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 SNX29P2Q8IUI4 249 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 MUC20Q8N307 709 aaPredicted RBP7.98□□□□□ -1.13
YBX3-215ENST00000544504 BOLLQ8N9W6 283 aaKnown RBP7.98□□□□□ -1.13
YBX3-215ENST00000544504 SMIM4Q8WVI0 70 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 DEDD2Q8WXF8 326 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 MED30Q96HR3 178 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 NICN1Q9BSH3 213 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 PECRQ9BY49 303 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 SRRQ9GZT4 340 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 TAS2R8Q9NYW2 309 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 TREM2Q9NZC2 230 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 PPIAL4AQ9Y536 164 aa7.98□□□□□ -1.13
YBX3-215ENST00000544504 A0A0A6YYD4 124 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 RFPL4AA6NLU0 287 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 RFPL4AL1F8VTS6 287 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 HAX1O00165 279 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 MFNGO00587 321 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 WNT9BO14905 357 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 RBBP9O75884 186 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ECDO95905 644 aaPredicted RBP7.97□□□□□ -1.13
YBX3-215ENST00000544504 CYB5R3P00387 301 aaPredicted RBP7.97□□□□□ -1.13
YBX3-215ENST00000544504 CSF3P09919 207 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 LMO1P25800 156 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 PRDX2P32119 198 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 SNU13P55769 128 aaKnown RBP7.97□□□□□ -1.13
YBX3-215ENST00000544504 TMEM50BP56557 158 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 GMFBP60983 142 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 SCN1BQ07699 218 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ZNF79Q15937 498 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 MOGAT2Q3SYC2 334 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ZNF260Q3ZCT1 412 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 SPRNQ5BIV9 151 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 NKAPLQ5M9Q1 402 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ATPAF1Q5TC12 328 aaPredicted RBP7.97□□□□□ -1.13
YBX3-215ENST00000544504 Q6P435 159 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 SLC36A1Q7Z2H8 476 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 IZUMO1Q8IYV9 350 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 OR8H2Q8N162 312 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ZNF561Q8N587 486 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 C19orf18Q8NEA5 215 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 OR5D13Q8NGL4 314 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 NEK7Q8TDX7 302 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ZFAND2BQ8WV99 257 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 IGFBPL1Q8WX77 278 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ST8SIA4Q92187 359 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ARHGAP5-AS1Q96IT6 56 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ABHD1Q96SE0 405 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 CHST6Q9GZX3 395 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 FAM234AQ9H0X4 552 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 WDR13Q9H1Z4 485 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 CHODLQ9H9P2 273 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 OR14J1Q9UGF5 321 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 ZNF107Q9UII5 783 aaPredicted RBP7.97□□□□□ -1.13
YBX3-215ENST00000544504 MGAT4AQ9UM21 535 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
YBX3-215ENST00000544504 DSCAMO60469 2012 aa7.96□□□□□ -1.13
YBX3-215ENST00000544504 DYSFO75923 2080 aa7.96□□□□□ -1.13
YBX3-215ENST00000544504 ISPDA4D126 451 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 TMEM235A6NFC5 223 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.96□□□□□ -1.14
YBX3-215ENST00000544504 WIPF1O43516 503 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 UPK1BO75841 260 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 OR2H2O95918 312 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 CSN2P05814 226 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 PSG2P11465 335 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 PAX1P15863 534 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 GNB3P16520 340 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 EGR1P18146 543 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 TBPP20226 339 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 DTYMKP23919 212 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 DUSP1P28562 367 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 CD80P33681 288 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 RCVRNP35243 200 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 CDKN1AP38936 164 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 GABRA2P47869 451 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 DSCR9P59020 149 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 DEFA1P59665 94 aa7.96□□□□□ -1.14
YBX3-215ENST00000544504 DEFA3P59666 94 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms