RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 D6RAR5 112 aa1□□□□□ -2.25
YBX3-214ENST00000544501 C15orf65H3BRN8 121 aa1□□□□□ -2.25
YBX3-214ENST00000544501 SIVA1O15304 175 aa1□□□□□ -2.25
YBX3-214ENST00000544501 P01737 135 aa1□□□□□ -2.25
YBX3-214ENST00000544501 IGHG2P01859 326 aa1□□□□□ -2.25
YBX3-214ENST00000544501 OR4Q2P0C623 313 aa1□□□□□ -2.25
YBX3-214ENST00000544501 OR5AC1P0C628 307 aa1□□□□□ -2.25
YBX3-214ENST00000544501 TGFBR2P37173 567 aa1□□□□□ -2.25
YBX3-214ENST00000544501 NUDT2P50583 147 aa1□□□□□ -2.25
YBX3-214ENST00000544501 RAB11AP62491 216 aa1□□□□□ -2.25
YBX3-214ENST00000544501 GRB2P62993 217 aaKnown RBP1□□□□□ -2.25
YBX3-214ENST00000544501 SLC35A1P78382 337 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ADIGQ0VDE8 80 aa1□□□□□ -2.25
YBX3-214ENST00000544501 RAB11BQ15907 218 aa1□□□□□ -2.25
YBX3-214ENST00000544501 KLHL40Q2TBA0 621 aa1□□□□□ -2.25
YBX3-214ENST00000544501 KRTAP21-3Q3LHN1 58 aa1□□□□□ -2.25
YBX3-214ENST00000544501 LINC00303Q3SY05 128 aa1□□□□□ -2.25
YBX3-214ENST00000544501 PLCXD3Q63HM9 321 aa1□□□□□ -2.25
YBX3-214ENST00000544501 AMMECR1LQ6DCA0 310 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ZNF470Q6ECI4 717 aa1□□□□□ -2.25
YBX3-214ENST00000544501 CLEC2AQ6UVW9 174 aa1□□□□□ -2.25
YBX3-214ENST00000544501 LINC00336Q6ZUF6 198 aa1□□□□□ -2.25
YBX3-214ENST00000544501 TRMT10CQ7L0Y3 403 aaKnown RBP1□□□□□ -2.25
YBX3-214ENST00000544501 FA2HQ7L5A8 372 aa1□□□□□ -2.25
YBX3-214ENST00000544501 TCF24Q7RTU0 167 aa1□□□□□ -2.25
YBX3-214ENST00000544501 PDPNQ86YL7 162 aa1□□□□□ -2.25
YBX3-214ENST00000544501 CMTM8Q8IZV2 173 aa1□□□□□ -2.25
YBX3-214ENST00000544501 OR52K2Q8NGK3 314 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ZFAND1Q8TCF1 268 aa1□□□□□ -2.25
YBX3-214ENST00000544501 GPX8Q8TED1 209 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ORAOV1Q8WV07 137 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ISOC2Q96AB3 205 aa1□□□□□ -2.25
YBX3-214ENST00000544501 YIPF6Q96EC8 236 aa1□□□□□ -2.25
YBX3-214ENST00000544501 Q96MT0 163 aa1□□□□□ -2.25
YBX3-214ENST00000544501 OR2V2Q96R30 315 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ZNF649Q9BS31 505 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ABCG5Q9H222 651 aa1□□□□□ -2.25
YBX3-214ENST00000544501 RDH14Q9HBH5 336 aa1□□□□□ -2.25
YBX3-214ENST00000544501 FAM60AQ9NP50 221 aa1□□□□□ -2.25
YBX3-214ENST00000544501 ASF1BQ9NVP2 202 aa1□□□□□ -2.25
YBX3-214ENST00000544501 MCTS1Q9ULC4 181 aaKnown RBP1□□□□□ -2.25
YBX3-214ENST00000544501 PPIL1Q9Y3C6 166 aa1□□□□□ -2.25
YBX3-214ENST00000544501 CCDC88AQ3V6T2 1871 aa1□□□□□ -2.25
YBX3-214ENST00000544501 RGPD8O14715 1765 aaPredicted RBP1□□□□□ -2.25
YBX3-214ENST00000544501 BCORQ6W2J9 1755 aa1□□□□□ -2.25
YBX3-214ENST00000544501 RGPD5Q99666 1765 aa1□□□□□ -2.25
YBX3-214ENST00000544501 COL5A3P25940 1745 aaPredicted RBP1□□□□□ -2.25
YBX3-214ENST00000544501 PDZD2O15018 2839 aa1□□□□□ -2.25
YBX3-214ENST00000544501 KMT2CQ8NEZ4 4911 aaKnown RBP1□□□□□ -2.25
YBX3-214ENST00000544501 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
YBX3-214ENST00000544501 USP9YO00507 2555 aaPredicted RBP1□□□□□ -2.25
YBX3-214ENST00000544501 MRC1P22897 1456 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 CCDC141Q6ZP82 1450 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 OTOGQ6ZRI0 2925 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ALPK3Q96L96 1907 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 UBR3Q6ZT12 1888 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 DLEC1Q9Y238 1755 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ELP1O95163 1332 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 FLNAP21333 2647 aaKnown RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 IGHV2OR16-5A0A0B4J2B6 119 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 GMNCA6NCL1 334 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ZNF99A8MXY4 864 aaPredicted RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 SUPT3HB4E1H0 165 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ZNF878C9JN71 531 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 J3QRE1 110 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 HMMRO75330 724 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 SNRPAP09012 282 aaKnown RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 HLA-GP17693 338 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 PSMB2P49721 201 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 GZMMP51124 257 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ATP6V0D1P61421 351 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 GBE1Q04446 702 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 CST9Q5W186 159 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 OTUD6AQ7L8S5 288 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 MRPL21Q7Z2W9 205 aaKnown RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 OR2W3Q7Z3T1 314 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 RPRMLQ8N4K4 120 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ZFP62Q8NB50 900 aaPredicted RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 BBOF1Q8ND07 529 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 LY6G5BQ8NDX9 201 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 OR8A1Q8NGG7 326 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 OR4D6Q8NGJ1 314 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 OR4C13Q8NGP0 309 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 FAM57AQ8TBR7 257 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 PHOSPHO2Q8TCD6 241 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 TMEM234Q8WY98 164 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 DERL3Q96Q80 235 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 NAA50Q9GZZ1 169 aaKnown RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 ARMC7Q9H6L4 198 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 VSIRQ9H7M9 311 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 SND1-IT1Q9HBX3 110 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ABCB9Q9NP78 766 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 PRSS16Q9NQE7 514 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 OR2S2Q9NQN1 319 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 TMEM100Q9NV29 134 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 MMACHCQ9Y4U1 282 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 ENPP4Q9Y6X5 453 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 EPPK1P58107 5090 aaKnown RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 EP300Q09472 2414 aaPredicted RBP0.99□□□□□ -2.25
YBX3-214ENST00000544501 CREBBPQ92793 2442 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms