RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 RFPL4AA6NLU0 287 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 RFPL4AL1F8VTS6 287 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 CEBPDP49716 269 aaPredicted RBP25.58■■□□□ 1.69
CCM2-219ENST00000544363 ACTBL2Q562R1 376 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 PAN3Q58A45 887 aaKnown RBP25.58■■□□□ 1.69
CCM2-219ENST00000544363 UPRTQ96BW1 309 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 MARVELD1Q9BSK0 173 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 ETAA1Q9NY74 926 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 DNAJB11Q9UBS4 358 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 NUBP2Q9Y5Y2 271 aa25.58■■□□□ 1.69
CCM2-219ENST00000544363 ARFGEF3Q5TH69 2177 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 IFNL4K9M1U5 179 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 IRF2P14316 349 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 MICBQ29980 383 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 OR51S1Q8NGJ8 323 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 HPS1Q92902 700 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 SEBOXQ9HB31 216 aaPredicted RBP25.57■■□□□ 1.68
CCM2-219ENST00000544363 TREM2Q9NZC2 230 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 WIPI2Q9Y4P8 454 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 ABCA4P78363 2273 aa25.57■■□□□ 1.68
CCM2-219ENST00000544363 NAPSAO96009 420 aa25.56■■□□□ 1.68
CCM2-219ENST00000544363 AMY2AP04746 511 aa25.56■■□□□ 1.68
CCM2-219ENST00000544363 ZNF735P0CB33 412 aa25.56■■□□□ 1.68
CCM2-219ENST00000544363 SHEQ5VZ18 495 aa25.56■■□□□ 1.68
CCM2-219ENST00000544363 CREB3L1Q96BA8 519 aa25.56■■□□□ 1.68
CCM2-219ENST00000544363 CHMP1AQ9HD42 196 aaPredicted RBP25.56■■□□□ 1.68
CCM2-219ENST00000544363 CBLN4Q9NTU7 201 aa25.56■■□□□ 1.68
CCM2-219ENST00000544363 A6NNC1 897 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 CYB5R3P00387 301 aaPredicted RBP25.55■■□□□ 1.68
CCM2-219ENST00000544363 PMP2P02689 132 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 PSG2P11465 335 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 PPOXP50336 477 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 TAS2R46P59540 309 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 OR5T2Q8NGG2 359 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 RIMS4Q9H426 269 aaPredicted RBP25.55■■□□□ 1.68
CCM2-219ENST00000544363 FBXO9Q9UK97 447 aaPredicted RBP25.55■■□□□ 1.68
CCM2-219ENST00000544363 DYSFO75923 2080 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 IGKV1D-8A0A087WSZ0 117 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 A0A1W2PPR1 153 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 LRRC30A6NM36 301 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 OR2AT4A6NND4 320 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 DISC1C4P0D8 188 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 MDH2P40926 338 aaKnown RBP25.55■■□□□ 1.68
CCM2-219ENST00000544363 AGAP6Q5VW22 663 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 RSBN1Q5VWQ0 802 aaPredicted RBP25.55■■□□□ 1.68
CCM2-219ENST00000544363 BTN2A1Q7KYR7 527 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 TGIF2LYQ8IUE0 185 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 OR5H2Q8NGV7 314 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 SLC6A7Q99884 636 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 NUDT15Q9NV35 164 aa25.55■■□□□ 1.68
CCM2-219ENST00000544363 CSN2P05814 226 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 PRDX2P32119 198 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 CD80P33681 288 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 SRSF1Q07955 248 aaKnown RBP eCLIP25.54■■□□□ 1.68
CCM2-219ENST00000544363 VAX1Q5SQQ9 334 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 Q6ZPA2 131 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 CD177Q8N6Q3 437 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 OR5AP2Q8NGF4 316 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 TMEM165Q9HC07 324 aa25.54■■□□□ 1.68
CCM2-219ENST00000544363 IGHV3OR15-7A0A075B7D8 119 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 CHRFAM7AQ494W8 412 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 FAM201AQ5SY85 155 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 PPA2Q9H2U2 334 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 ZNF286AQ9HBT8 521 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 ANXA10Q9UJ72 324 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 SCP2D1Q9UJQ7 156 aa25.53■■□□□ 1.68
CCM2-219ENST00000544363 IGKV1D-17A0A075B6S4 117 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 INMT-MINDY4F8WBC2 141 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 PSPNO60542 156 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 GOSR1O95249 250 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 IFNA6P05013 189 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 OR3A3P47888 321 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 COL10A1Q03692 680 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 SRSF7Q16629 238 aaKnown RBP eCLIP25.52■■□□□ 1.68
CCM2-219ENST00000544363 C11orf71Q6IPW1 123 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 VRK1Q99986 396 aaPredicted RBP25.52■■□□□ 1.68
CCM2-219ENST00000544363 SLC2A8Q9NY64 477 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 RALYQ9UKM9 306 aaKnown RBP25.52■■□□□ 1.68
CCM2-219ENST00000544363 DOPEY1Q5JWR5 2465 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 TRAV6A0A075B6T7 132 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 TRBV6-6A0A0A6YYG2 114 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 NDUFB6O95139 128 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 CD8AP01732 235 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 TFF1P04155 84 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 DANCRP0C864 163 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 RBMS2Q15434 407 aaKnown RBP25.52■■□□□ 1.68
CCM2-219ENST00000544363 PLPPR1Q8TBJ4 325 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 MRPL30Q8TCC3 161 aaKnown RBP25.52■■□□□ 1.68
CCM2-219ENST00000544363 PRRT1Q99946 306 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 C20orf85Q9H1P6 137 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 Q9N2K0 584 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 DCAF16Q9NXF7 216 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 METRNQ9UJH8 293 aa25.52■■□□□ 1.68
CCM2-219ENST00000544363 HPXP02790 462 aa25.51■■□□□ 1.67
CCM2-219ENST00000544363 Q6ZS49 121 aa25.51■■□□□ 1.67
CCM2-219ENST00000544363 DTX2Q86UW9 622 aa25.51■■□□□ 1.67
CCM2-219ENST00000544363 C1orf87Q8N0U7 546 aa25.51■■□□□ 1.67
CCM2-219ENST00000544363 H7C1Q1 480 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 SOD3P08294 240 aa25.5■■□□□ 1.67
CCM2-219ENST00000544363 H2AFB2P0C5Z0 115 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms