RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NCS1P62166 190 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 ARF6P62330 175 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 MRPS15P82914 257 aaKnown RBP5.23□□□□□ -1.57
LTBR-212ENST00000543542 KRTAP1-1Q07627 177 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 RBM39Q14498 530 aaKnown RBP5.23□□□□□ -1.57
LTBR-212ENST00000543542 FAM189A2Q15884 450 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 C2orf76Q3KRA6 126 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 KRBOX4Q5JUW0 171 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 FAM120AOSQ5T036 256 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 Q6P435 159 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 SFXN4Q6P4A7 337 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 BRICD5Q6PL45 260 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 C17orf107Q6ZR85 190 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 OR2W3Q7Z3T1 314 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 ANKRD13BQ86YJ7 626 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 CROCCP3Q8IVE0 287 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 OR8H2Q8N162 312 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 BPIFB2Q8N4F0 458 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 TPRX1Q8N7U7 411 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 SUMF2Q8NBJ7 301 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 TMEM104Q8NE00 496 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 OR4S1Q8NGB4 309 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 PHF21AQ96BD5 680 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 DPCDQ9BVM2 203 aaPredicted RBP5.23□□□□□ -1.57
LTBR-212ENST00000543542 BARHL1Q9BZE3 327 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 LIN7BQ9HAP6 207 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 CHMP1AQ9HD42 196 aaPredicted RBP5.23□□□□□ -1.57
LTBR-212ENST00000543542 LPAR3Q9UBY5 353 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 RPUSD1Q9UJJ7 312 aaKnown RBP5.23□□□□□ -1.57
LTBR-212ENST00000543542 RAB22AQ9UL26 194 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 INSIG2Q9Y5U4 225 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 PEX16Q9Y5Y5 336 aa5.23□□□□□ -1.57
LTBR-212ENST00000543542 CREBBPQ92793 2442 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 MEIKINA0A087WXM9 373 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 TRGV10A0A0A0MS01 117 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 A0A0B4J203 849 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 TMEM272A0A1B0GTI8 110 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 MEX3AA1L020 520 aaKnown RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 UBE2QL1A1L167 161 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 METTL21EPA6NDL7 271 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A10PA6NDY2 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A18PA6NE21 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A16PA6NEW6 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A20PA6NIJ5 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A8PA6NJQ4 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A7PA6NKC0 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A22PA8MWA6 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 TMEM14DPA8MWL7 114 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A12PA8MX19 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A5PA8MXJ8 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A23PA8MXZ1 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 PSPNO60542 156 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 ZNF737O75373 536 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 IL1AP01583 271 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A13PP0C7W8 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FAM90A24PP0C7X0 464 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 SNRPBP14678 240 aaKnown RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 FUT3P21217 361 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 LMO1P25800 156 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 BLVRBP30043 206 aaPredicted RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 GLP1RP43220 463 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 OR3A1P47881 315 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 KCNJ3P48549 501 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 VEGFCP49767 419 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 RPS27AP62979 156 aaKnown RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 MEF2CQ06413 473 aaPredicted RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 AESQ08117 197 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 C11orf91Q3C1V1 193 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 CHRFAM7AQ494W8 412 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 NHLRC3Q5JS37 347 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 RAB12Q6IQ22 244 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 USP43Q70EL4 1123 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 LYPD6Q86Y78 171 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 Q8NFD4 153 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 OR56B1Q8NGI3 324 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 NANPQ8TBE9 248 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 SETD6Q8TBK2 473 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 LHX4Q969G2 390 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 SLC25A28Q96A46 364 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 Q96M66 194 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 ZNF714Q96N38 554 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 NICN1Q9BSH3 213 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 NAA50Q9GZZ1 169 aaKnown RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 ATG5Q9H1Y0 275 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 GAL3ST2Q9H3Q3 398 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 SEBOXQ9HB31 216 aaPredicted RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 C19orf12Q9NSK7 152 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 PLEKHJ1Q9NW61 149 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 ETAA1Q9NY74 926 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 CDC42EP3Q9UKI2 254 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 POLR3KQ9Y2Y1 108 aaPredicted RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 DOCK11Q5JSL3 2073 aa5.22□□□□□ -1.57
LTBR-212ENST00000543542 FLNAP21333 2647 aaKnown RBP5.22□□□□□ -1.57
LTBR-212ENST00000543542 ZNF469Q96JG9 3925 aaPredicted RBP5.21□□□□□ -1.57
LTBR-212ENST00000543542 A0A075B6Q4 140 aa5.21□□□□□ -1.58
LTBR-212ENST00000543542 IGHV3OR16-10A0A075B7F0 116 aa5.21□□□□□ -1.58
LTBR-212ENST00000543542 TRAV24A0A0B4J272 114 aa5.21□□□□□ -1.58
LTBR-212ENST00000543542 TRAV40A0A0B4J280 105 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms