RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 IGHV3-9P01782 118 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 COX5BP10606 129 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 RFC3P40938 356 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 NPBWR2P48146 333 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 RAB5CP51148 216 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 PRDX4Q13162 271 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 SPINK14Q6IE38 97 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 MRPL21Q7Z2W9 205 aaKnown RBP11.61□□□□□ -0.55
PPME1-208ENST00000543525 OR56B2PQ8NGI1 322 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 PSMF1Q92530 271 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 BSCL2Q96G97 398 aaPredicted RBP11.61□□□□□ -0.55
PPME1-208ENST00000543525 REPIN1Q9BWE0 567 aaKnown RBP11.61□□□□□ -0.55
PPME1-208ENST00000543525 SAV1Q9H4B6 383 aaPredicted RBP11.61□□□□□ -0.55
PPME1-208ENST00000543525 WFDC1Q9HC57 220 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 SLC7A10Q9NS82 523 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 STRAPQ9Y3F4 350 aaKnown RBP11.61□□□□□ -0.55
PPME1-208ENST00000543525 KPTNQ9Y664 436 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 DMXL1Q9Y485 3027 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 TRDCB7Z8K6 153 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 F10P00742 488 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 OR8U9P0C7N5 309 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 DANCRP0C864 163 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 BCL3P20749 454 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 CAMLGP49069 296 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 SRYQ05066 204 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 PEA15Q15121 130 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 CLEC9AQ6UXN8 241 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 ZDHHC23Q8IYP9 409 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 ZNF565Q8N9K5 539 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 OR2M7Q8NG81 312 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 OR52M1Q8NGK5 317 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 OR4D5Q8NGN0 318 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 CDS2O95674 445 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 GLI4P10075 376 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 SPP1P10451 314 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 CCNOP22674 350 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 FGF12P61328 243 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 RND3P61587 244 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 IGSF11Q5DX21 431 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 ABHD17BQ5VST6 288 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 MEX3BQ6ZN04 569 aaKnown RBP11.6□□□□□ -0.55
PPME1-208ENST00000543525 Q6ZPA2 131 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 C1orf210Q8IVY1 113 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 MKXQ8IYA7 352 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 SLAMF9Q96A28 289 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 APOBEC3DQ96AK3 386 aaPredicted RBP11.6□□□□□ -0.55
PPME1-208ENST00000543525 TP53RKQ96S44 253 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 SPIN2AQ99865 258 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 SPIN2BQ9BPZ2 258 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 DDA1Q9BW61 102 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 TMEM222Q9H0R3 208 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 Q9N2K0 584 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 ABI3Q9P2A4 366 aa11.6□□□□□ -0.55
PPME1-208ENST00000543525 UBE2J1Q9Y385 318 aaPredicted RBP11.6□□□□□ -0.55
PPME1-208ENST00000543525 EP300Q09472 2414 aaPredicted RBP11.59□□□□□ -0.55
PPME1-208ENST00000543525 TK1P04183 234 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 SNCAP37840 140 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 LHX2P50458 406 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 CEACAM21Q3KPI0 293 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 ZNF695Q8IW36 515 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 DMBX1Q8NFW5 382 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 HIST1H2AAQ96QV6 131 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 ZNF703Q9H7S9 590 aaPredicted RBP11.59□□□□□ -0.55
PPME1-208ENST00000543525 SMCO4Q9NRQ5 59 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 SDK2Q58EX2 2172 aa11.59□□□□□ -0.55
PPME1-208ENST00000543525 A0A096LPE4 126 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 A0A1W2PPZ6 126 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 C5orf49A4QMS7 147 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 FAM157AC9JC47 383 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 TRAPPC2LH3BP13 241 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 CTXN2P0C2S0 81 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 JMJD7P0C870 316 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 NFYBP25208 207 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 ARR3P36575 388 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 HAAOP46952 286 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 GPM6AP51674 278 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 UCP2P55851 309 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 CLDN18P56856 261 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 ZNF616Q08AN1 781 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 DAZAP2Q15038 168 aaPredicted RBP11.58□□□□□ -0.55
PPME1-208ENST00000543525 MPV17LQ2QL34 196 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 MIDNQ504T8 468 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 SPIN3Q5JUX0 258 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 C9orf135Q5VTT2 229 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 LINC00518Q8N0U6 118 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 BATF2Q8N1L9 274 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 TMEM56Q96MV1 263 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 PRRG4Q9BZD6 226 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 CALHM2Q9HA72 323 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 C19orf12Q9NSK7 152 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 ZNF175Q9Y473 711 aa11.58□□□□□ -0.55
PPME1-208ENST00000543525 KLF2Q9Y5W3 355 aaPredicted RBP11.58□□□□□ -0.55
PPME1-208ENST00000543525 TMEM56-RWDD3S4R434 201 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms