RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FGF16O43320 207 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CST4P01036 141 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 IFNA14P01570 189 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 IGHG4P01861 327 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CALCBP10092 127 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 SNU13P55769 128 aaKnown RBP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 FXYD6P3P58550 94 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 LINC00310P59036 64 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ZP1P60852 638 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ESRRGP62508 458 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 GRB2P62993 217 aaKnown RBP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 MEF2CQ06413 473 aaPredicted RBP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 DIAPH2-AS1Q14236 149 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 GRK1Q15835 563 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 HLA-DRB5Q30154 266 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CEACAM21Q3KPI0 293 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CYBRD1Q53TN4 286 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 FGD3Q5JSP0 725 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 UTF1Q5T230 341 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 LGALS9CQ6DKI2 356 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ASRGL1Q7L266 308 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 TCF23Q7RTU1 214 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 MOB3BQ86TA1 216 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 RTN4RL2Q86UN3 420 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 COMMD2Q86X83 199 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ANGPTL5Q86XS5 388 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ADGRG5Q8IZF4 528 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 OR8H2Q8N162 312 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 OR5A2Q8NGI9 324 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CASTOR1Q8WTX7 329 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 LEAP2Q969E1 77 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CREB3L1Q96BA8 519 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 UBE2E2Q96LR5 201 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 KCTD7Q96MP8 289 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 C7orf26Q96N11 449 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 CGREF1Q99674 301 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 KAT8Q9H7Z6 458 aaKnown RBP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ABCB9Q9NP78 766 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 STEAP1Q9UHE8 339 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 RAB21Q9UL25 225 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 STUB1Q9UNE7 303 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 TMEM5Q9Y2B1 443 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 LINC00312Q9Y6C7 94 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.65□□□□□ -1.83
LIMS1-214ENST00000542845 IGHV4OR15-8A0A075B7B6 117 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 A0A087WW49 117 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 A0A087X0M5 115 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 A0A1B0GX30 115 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 DHRS12A0PJE2 317 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A18PA6NE21 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A16PA6NEW6 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A20PA6NIJ5 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A9PA6NNJ1 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A12PA8MX19 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A5PA8MXJ8 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 NPIPB6E9PJ23 425 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 G3V318 75 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 LY6LH3BQJ8 138 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FFAR1O14842 300 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 ANGPT2O15123 496 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 SCAF4O95104 1147 aaKnown RBP3.64□□□□□ -1.83
LIMS1-214ENST00000542845 ZNF682O95780 498 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 TXNDC12O95881 172 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 IGLV1-47P01700 117 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 APOC1P02654 83 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 TFAP2AP05549 437 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 GYPBP06028 91 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 H2BFMP0C1H6 154 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A15PP0C7V4 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A13PP0C7W8 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A14PP0C7W9 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM90A24PP0C7X0 464 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 TMEM225BP0DP42 221 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 PSMB8P28062 276 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 DUSP1P28562 367 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FMO3P31513 532 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 SLC6A6P31641 620 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 ARL3P36405 182 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 REG1BP48304 166 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 RAB9AP51151 201 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 RPS7P62081 194 aaKnown RBP3.64□□□□□ -1.83
LIMS1-214ENST00000542845 SELENOWP63302 87 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 EWSR1Q01844 656 aaKnown RBP eCLIP3.64□□□□□ -1.83
LIMS1-214ENST00000542845 LTC4SQ16873 150 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 ZNF684Q5T5D7 378 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 VTCN1Q7Z7D3 282 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 IZUMO1Q8IYV9 350 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 OFCC1Q8IZS5 231 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM71E2Q8N5Q1 922 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 DEFB125Q8N687 156 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FAM86B1Q8N7N1 296 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 OR52N4Q8NGI2 321 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 OR4D6Q8NGJ1 314 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 FANK1Q8TC84 345 aa3.64□□□□□ -1.83
LIMS1-214ENST00000542845 RGP1Q92546 391 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms