RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 FAM117AQ9C073 453 aa12.52□□□□□ -0.4
TRPM1-203ENST00000542188 F11P03951 625 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 MAS1LP35410 378 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 NUBPLQ8TB37 319 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 NEU3Q9UQ49 428 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 ACVR1Q04771 509 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 LDLRAD3Q86YD5 345 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 RCC2Q9P258 522 aaKnown RBP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 TMEM202A6NGA9 273 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 CYB5R3P00387 301 aaPredicted RBP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 SEC11BP0C7V7 166 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 ZNF275Q9NSD4 429 aaPredicted RBP12.52□□□□□ -0.41
TRPM1-203ENST00000542188 C1RLQ9NZP8 487 aa12.52□□□□□ -0.41
TRPM1-203ENST00000542188 IGHV3-43A0A0B4J1X8 118 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 TCRBV16S1A1N1A0A5B0 115 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 IGHV3-43DP0DP04 118 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 MRPS11P82912 194 aaKnown RBP12.51□□□□□ -0.41
TRPM1-203ENST00000542188 PWWP2BQ6NUJ5 590 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 CLEC18BQ6UXF7 455 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 GMPPAQ96IJ6 420 aaPredicted RBP12.51□□□□□ -0.41
TRPM1-203ENST00000542188 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
TRPM1-203ENST00000542188 PPIHO43447 177 aaKnown RBP12.51□□□□□ -0.41
TRPM1-203ENST00000542188 COX7A1P24310 79 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 TNFAIP6P98066 277 aaPredicted RBP12.51□□□□□ -0.41
TRPM1-203ENST00000542188 FAM53BQ14153 422 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 NUDT8Q8WV74 236 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 MYO10Q9HD67 2058 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 J3KRW8 73 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 DNAL4O96015 105 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 IL4P05112 153 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 DEFB103AP81534 67 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 PDCD1Q15116 288 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 PAQR9Q6ZVX9 377 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 C8orf44Q96CB5 159 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 PITX3O75364 302 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
TRPM1-203ENST00000542188 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 HCFC2Q9Y5Z7 792 aa12.51□□□□□ -0.41
TRPM1-203ENST00000542188 CAPZBP47756 277 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 LYPD8Q6UX82 237 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 A8MWL6 223 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 ST6GAL1P15907 406 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 OTPQ5XKR4 325 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 ZNF770Q6IQ21 691 aaPredicted RBP12.5□□□□□ -0.41
TRPM1-203ENST00000542188 GUCD1Q96NT3 240 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 IL19Q9UHD0 177 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 AUP1Q9Y679 476 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 KCNE3Q9Y6H6 103 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 A0A0B4J2E0 115 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 A0A1B0GU03 582 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 A0A1B0GX12 115 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 ZNF345Q14585 488 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 RFESDQ8TAC1 157 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 FGF22Q9HCT0 170 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 GPR27Q9NS67 375 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 RAXQ9Y2V3 346 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 HTN1P15515 57 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 CDKN2AP42771 156 aaKnown RBP12.5□□□□□ -0.41
TRPM1-203ENST00000542188 RAB9AP51151 201 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 FAM53AQ6NSI3 398 aaPredicted RBP12.5□□□□□ -0.41
TRPM1-203ENST00000542188 TEPPQ6URK8 271 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 SLC25A42Q86VD7 318 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 TM4SF19Q96DZ7 209 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 ST6GAL2Q96JF0 529 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 MTCH2Q9Y6C9 303 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 MKRN2OSH3BPM6 223 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 VDAC1P21796 283 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 OR1P1Q8NH06 330 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 RHNO1Q9BSD3 238 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 OR51M1Q9H341 326 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 MPC1Q9Y5U8 109 aa12.5□□□□□ -0.41
TRPM1-203ENST00000542188 SMIM13P0DJ93 91 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 DDTP30046 118 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
TRPM1-203ENST00000542188 ZBTB34Q8NCN2 500 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 LSM10Q969L4 123 aaKnown RBP12.49□□□□□ -0.41
TRPM1-203ENST00000542188 LOXL2Q9Y4K0 774 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 A0A0A6YYD5 115 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 CCR5P51681 352 aa12.49□□□□□ -0.41
TRPM1-203ENST00000542188 DEFB109BQ30KR1 87 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms