RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 FHL1Q13642 323 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 MSMO1Q15800 293 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 RGS7BPQ6MZT1 257 aaPredicted RBP14.04□□□□□ -0.16
VARS2-212ENST00000542001 RTL8AQ9BWD3 113 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 CACNG5Q9UF02 275 aa14.04□□□□□ -0.16
VARS2-212ENST00000542001 KLF13Q9Y2Y9 288 aaPredicted RBP14.04□□□□□ -0.16
VARS2-212ENST00000542001 LOC105371267A0A1B0GV96 52 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 ACTL6BO94805 426 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 TMEM50BP56557 158 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 TBC1D26Q86UD7 250 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 PUSL1Q8N0Z8 303 aaKnown RBP14.03□□□□□ -0.16
VARS2-212ENST00000542001 OR2C3Q8N628 320 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 GBF1Q92538 1859 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 hCG_1809904A0A1W2PP81 198 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 A0A1W2PR64 198 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 A0A1W2PRV1 198 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 OR2A4O95047 310 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 NGFP01138 241 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 PPYP01298 95 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 CELA3AP09093 270 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 KCNJ3P48549 501 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 CATR1Q13166 79 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 OR2A7Q96R45 310 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 TLNRD1Q9H1K6 362 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 OPN1MWP04001 364 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 OPN1MW2P0DN77 364 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 OPN1MW3P0DN78 364 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 ECI1P42126 302 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 ZP4Q12836 540 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 ZNF154Q13106 437 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 PMS2CLQ68D20 193 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 FAM58AQ8N1B3 248 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 TAAR9Q96RI9 348 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 PSENENQ9NZ42 101 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 GPR132Q9UNW8 380 aa14.03□□□□□ -0.16
VARS2-212ENST00000542001 UBE2L5PA0A1B0GUS4 154 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 MT-CO3P00414 261 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 FSTP19883 344 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 CEACAM6P40199 344 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 FNDC7Q5VTL7 733 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 BTNL3Q6UXE8 466 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 AQP3Q92482 292 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 RPH3ALQ9UNE2 315 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 DOCK11Q5JSL3 2073 aa14.02□□□□□ -0.16
VARS2-212ENST00000542001 TUBAL3A6NHL2 446 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 PRSS44E7EML9 344 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 PHYHD1Q5SRE7 291 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 MSL2Q9HCI7 577 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 CHST1O43916 411 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 SCTP09683 121 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 NDUFB7P17568 137 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 H2BFWTQ7Z2G1 175 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 C5orf24Q7Z6I8 188 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 HOGA1Q86XE5 327 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 FAM185AQ8N0U4 392 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 CARFQ8N187 725 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 SLC35G3Q8N808 338 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 H1FXQ92522 213 aaKnown RBP14.02□□□□□ -0.17
VARS2-212ENST00000542001 SHARPINQ9H0F6 387 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 MED9Q9NWA0 146 aa14.02□□□□□ -0.17
VARS2-212ENST00000542001 GNG3P63215 75 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 HES3Q5TGS1 186 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 PRAMEF5Q5TYX0 476 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 PRAMEF6Q5VXH4 476 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 SLC16A13Q7RTY0 426 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 DEFB124Q8NES8 71 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 PPP1R35Q8TAP8 253 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 DNASE2BQ8WZ79 361 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 ALX4Q9H161 411 aaPredicted RBP14.01□□□□□ -0.17
VARS2-212ENST00000542001 IL17BQ9UHF5 180 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 CLEC18AA5D8T8 446 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 ZNF727A8MUV8 499 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 TOX3O15405 576 aaPredicted RBP14.01□□□□□ -0.17
VARS2-212ENST00000542001 ACKR3P25106 362 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 ZNF239Q16600 458 aaKnown RBP14.01□□□□□ -0.17
VARS2-212ENST00000542001 CLEC18CQ8NCF0 446 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 MRGPRDQ8TDS7 321 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 CLDN16Q9Y5I7 305 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 SH2D1BO14796 132 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 SPRY3O43610 288 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 OR3A1P47881 315 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 NPBWR1P48145 328 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 PCOLCEQ15113 449 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 OR10S1Q8NGN2 331 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 ERGIC1Q969X5 290 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 MMP26Q9NRE1 261 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 LPAR3Q9UBY5 353 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 LIPGQ9Y5X9 500 aa14.01□□□□□ -0.17
VARS2-212ENST00000542001 PRR19A6NJB7 356 aa14□□□□□ -0.17
VARS2-212ENST00000542001 PCNX2A6NKB5 2137 aa14□□□□□ -0.17
VARS2-212ENST00000542001 MUC1P15941 1255 aaPredicted RBP14□□□□□ -0.17
VARS2-212ENST00000542001 MDKP21741 143 aaPredicted RBP14□□□□□ -0.17
VARS2-212ENST00000542001 ARR3P36575 388 aa14□□□□□ -0.17
VARS2-212ENST00000542001 SSPNQ14714 243 aa14□□□□□ -0.17
VARS2-212ENST00000542001 EIF2S3LQ2VIR3 472 aaKnown RBP14□□□□□ -0.17
VARS2-212ENST00000542001 MYPOPQ86VE0 399 aaPredicted RBP14□□□□□ -0.17
VARS2-212ENST00000542001 CLDN23Q96B33 292 aa14□□□□□ -0.17
VARS2-212ENST00000542001 ADGRG7Q96K78 797 aa14□□□□□ -0.17
VARS2-212ENST00000542001 IGHV1-45A0A0A0MS14 117 aa14□□□□□ -0.17
VARS2-212ENST00000542001 A0A1W2PPH5 198 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms