RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 C4orf3Q8WVX3 66 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 COQ2Q96H96 371 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 OR5B12Q96R08 314 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 FEVQ99581 238 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 SEBOXQ9HB31 216 aaPredicted RBP9.18□□□□□ -0.94
COPA-205ENST00000541366 ISYNA1Q9NPH2 558 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 TAS2R3Q9NYW6 316 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 OR52A1Q9UKL2 312 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 GSTK1Q9Y2Q3 226 aa9.18□□□□□ -0.94
COPA-205ENST00000541366 ODAMA1E959 279 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 J3QR06 171 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 ZNF254O75437 659 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 OR2H2O95918 312 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 ELANEP08246 267 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 POU3F4P49335 361 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 CFHR3Q02985 330 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
COPA-205ENST00000541366 LTC4SQ16873 150 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 SLC35D3Q5M8T2 416 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 FAM27D1Q5T7N8 215 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 TMEM236Q5W0B7 351 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 CD300LDQ6UXZ3 194 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 Q6ZSR3 168 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 OR9G1Q8NH87 305 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 HRASLS5Q96KN8 279 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 PPIL3Q9H2H8 161 aaKnown RBP9.17□□□□□ -0.94
COPA-205ENST00000541366 REEP1Q9H902 201 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 GNB4Q9HAV0 340 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 GLS2Q9UI32 602 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 R4GMQ9 66 aa9.17□□□□□ -0.94
COPA-205ENST00000541366 TRBV2A0A0J9YWF9 115 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 A0A1W2PPE3 182 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 SAP30O75446 220 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 JTBO76095 146 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 GP9P14770 177 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 REG1BP48304 166 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 GNG10P50151 68 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 INSL3P51460 131 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 FUT6P51993 359 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 GNB1P62873 340 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 SCN1BQ07699 218 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 ATXN7L3Q14CW9 347 aaPredicted RBP9.16□□□□□ -0.94
COPA-205ENST00000541366 OR2T5Q6IEZ7 315 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 ZNF322Q6U7Q0 402 aaPredicted RBP9.16□□□□□ -0.94
COPA-205ENST00000541366 TMEM179BQ7Z7N9 219 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 ENTHD1Q8IYW4 607 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 Q8N9W7 124 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 OR2T29Q8NH02 315 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 DCUN1D4Q92564 292 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 CMTM5Q96DZ9 223 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 BORCS8Q96FH0 119 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
COPA-205ENST00000541366 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 ABCG5Q9H222 651 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 KLK15Q9H2R5 256 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 PLEKHA1Q9HB21 404 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 EXOSC4Q9NPD3 245 aaKnown RBP9.16□□□□□ -0.94
COPA-205ENST00000541366 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
COPA-205ENST00000541366 SIRT4Q9Y6E7 314 aaPredicted RBP9.16□□□□□ -0.94
COPA-205ENST00000541366 IGKV1-12A0A0C4DH73 117 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 TCRBV5S2A0A599 114 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 ZNF729A6NN14 1252 aaPredicted RBP9.15□□□□□ -0.94
COPA-205ENST00000541366 DHRS7CA6NNS2 312 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 LDLRAD4O15165 306 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 RPP14O95059 124 aaKnown RBP9.15□□□□□ -0.94
COPA-205ENST00000541366 IGKV1D-12P01611 117 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 IGHG4P01861 327 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 CGB3P0DN86 165 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 CGB7P0DN87 165 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 CCL1P22362 96 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 VEGFCP49767 419 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 CXCR4P61073 352 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 MADCAM1Q13477 382 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 KIAA0141Q14154 515 aaPredicted RBP9.15□□□□□ -0.94
COPA-205ENST00000541366 KRBOX4Q5JUW0 171 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 SPIN3Q5JUX0 258 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 BCDIN3DQ7Z5W3 292 aaKnown RBP9.15□□□□□ -0.94
COPA-205ENST00000541366 ZNF429Q86V71 674 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 CATSPERDQ86XM0 798 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 TGIF2LXQ8IUE1 241 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 Q8IYB0 196 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 RFESDQ8TAC1 157 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 GIPC3Q8TF64 312 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 ASB17Q8WXJ9 295 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 RFT1Q96AA3 541 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 PCDHB16Q9NRJ7 776 aa9.15□□□□□ -0.94
COPA-205ENST00000541366 MRM2Q9UI43 246 aaKnown RBP9.15□□□□□ -0.94
COPA-205ENST00000541366 AMMECR1Q9Y4X0 333 aaPredicted RBP9.15□□□□□ -0.94
COPA-205ENST00000541366 RYR1P21817 5038 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 KMT2AQ03164 3969 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 IGKV1-9A0A0C4DH69 117 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 KBTBD11-OT1A0A1B0GTJ5 212 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 FUOMA2VDF0 154 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 I3L521 148 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 SH2D1BO14796 132 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 SYT7O43581 403 aa9.14□□□□□ -0.95
COPA-205ENST00000541366 HMGN1P05114 100 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms