RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 AADACL3Q5VUY0 350 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 Q6ZS92 163 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 Q6ZSR3 168 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 SSX9Q7RTT3 188 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 COMMD2Q86X83 199 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 UEVLDQ8IX04 471 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 GATSQ8NAP1 163 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 OR13G1Q8NGZ3 307 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 RAB39BQ96DA2 213 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 THOC3Q96J01 351 aaKnown RBP9.05□□□□□ -0.96
CHFR-219ENST00000541341 P2RX4Q99571 388 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 NAA60Q9H7X0 242 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 PLEKHF2Q9H8W4 249 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 PNO1Q9NRX1 252 aaKnown RBP9.05□□□□□ -0.96
CHFR-219ENST00000541341 VDAC3Q9Y277 283 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 AMDHD2Q9Y303 409 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 NSG1A0A0A6YYJ2 146 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 TRAV1-1A0A0B4J248 108 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 A0A1W2PPH5 198 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 ETV2O00321 342 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 PITX3O75364 302 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 SCAF4O95104 1147 aaKnown RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 CLPSP04118 112 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 RAB4AP20338 218 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 GRNP28799 593 aaKnown RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 BLVRBP30043 206 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 UBE2KP61086 200 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 VAMP2P63027 116 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 HGFACQ04756 655 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 FOXO1Q12778 655 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 CNN3Q15417 329 aaKnown RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 UBE2V2Q15819 145 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 TAF9Q16594 264 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 SLC25A53Q5H9E4 307 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 GGNBP1Q5YKI7 109 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 POMZP3Q6PJE2 187 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 FBXW12Q6X9E4 464 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 LIAT1Q6ZQX7 453 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 REC114Q7Z4M0 266 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 ABHD12BQ7Z5M8 362 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 ANKRD37Q7Z713 158 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 MRPL52Q86TS9 123 aaKnown RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 C1orf87Q8N0U7 546 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 FAM24BQ8N5W8 94 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 SEMA6DQ8NFY4 1073 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 OR1N1Q8NGS0 311 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 OR8U1Q8NH10 309 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 OR6X1Q8NH79 312 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 DOK4Q8TEW6 326 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 ZNF721Q8TF20 911 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 C11orf40Q8WZ69 217 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 TSLPQ969D9 159 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 ADAT3Q96EY9 351 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 IP6K3Q96PC2 410 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 SSX3Q99909 188 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 WDR77Q9BQA1 342 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 NICN1Q9BSH3 213 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 NAA11Q9BSU3 229 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 ST6GALNAC5Q9BVH7 336 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 PECRQ9BY49 303 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 OR8D2Q9GZM6 311 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 METTL9Q9H1A3 318 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 NELFAQ9H3P2 528 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 KCNK15Q9H427 330 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 GPR84Q9NQS5 396 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 PLSCR2Q9NRY7 297 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 PLEKHJ1Q9NW61 149 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 PPP1R14DQ9NXH3 145 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 PLA2G3Q9NZ20 509 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 C19orf25Q9UFG5 118 aaPredicted RBP9.04□□□□□ -0.96
CHFR-219ENST00000541341 ANXA10Q9UJ72 324 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 SH3BGRL2Q9UJC5 107 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 PITPNC1Q9UKF7 332 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 HS3ST3B1Q9Y662 390 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 CNTRLQ7Z7A1 2325 aa9.04□□□□□ -0.96
CHFR-219ENST00000541341 DCHS2Q6V1P9 2916 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 APCP25054 2843 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 AKAP9Q99996 3911 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 OR2W5A6NFC9 320 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 A6NLC8 198 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF726A6NNF4 738 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF732B4DXR9 585 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 MS4A18H0YCH9 400 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 RPL36A-HNRNPH2H7BZ11 118 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 VAMP5O95183 116 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 OPN1MWP04001 364 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 CELA2AP08217 269 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 CTXN2P0C2S0 81 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 OPN1MW2P0DN77 364 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 OPN1MW3P0DN78 364 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 LMO1P25800 156 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 RPS27P42677 84 aaKnown RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 ZNF41P51814 821 aaPredicted RBP9.03□□□□□ -0.96
CHFR-219ENST00000541341 Q0VFX4 171 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 PMS2P11Q13670 270 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 PCOLCEQ15113 449 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 NSDHLQ15738 373 aa9.03□□□□□ -0.96
CHFR-219ENST00000541341 NNATQ16517 81 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms