RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 DDTP30046 118 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF239Q16600 458 aaKnown RBP12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 RNFT1Q5M7Z0 435 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 ALKBH2Q6NS38 261 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 DEGS2Q6QHC5 323 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 P4HA3Q7Z4N8 544 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 HOGA1Q86XE5 327 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 ERGIC1Q969X5 290 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TMEM14DPA8MWL7 114 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 FAM157AC9JC47 383 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TCAPO15273 167 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 SLC31A2O15432 143 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TRAPPC6AO75865 159 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TMEM225BP0DP42 221 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 FCGR2CP31995 323 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 CAMLGP49069 296 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 CYB561P49447 251 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 RBP2P50120 134 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TMEM33P57088 247 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 QRFPP83859 136 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TLE1Q04724 770 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 THEM4Q5T1C6 240 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 TMEM230Q96A57 120 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 REEP6Q96HR9 211 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 SPOCK3Q9BQ16 436 aa12.44□□□□□ -0.42
SFSWAP-210ENST00000541286 FAM230AA0A1W2PPH8 454 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 CYB5BO43169 146 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 IL2RAP01589 272 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 IGHMP01871 453 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 RRADP55042 308 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 RPS23P62266 143 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 ARG2P78540 354 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 KISS1Q15726 138 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 IAH1Q2TAA2 248 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 OR13G1Q8NGZ3 307 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 CHST5Q9GZS9 411 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 CYTIPO60759 359 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 DIRAS3O95661 229 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 CHRM2P08172 466 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 RBMXP38159 391 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 CLEC12BQ2HXU8 276 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 KHDC3LQ587J8 217 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 RAET1LQ5VY80 246 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 OR9K2Q8NGE7 335 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 OR56B1Q8NGI3 324 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 PLEKHJ1Q9NW61 149 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 IGKV1-9A0A0C4DH69 117 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 CFPP27918 469 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 RPL12P30050 165 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 TAS2R31P59538 309 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 DYRK2Q92630 601 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
SFSWAP-210ENST00000541286 MYO18BQ8IUG5 2567 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 K7EPK0 472 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 SFT2D2O95562 160 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 CSTBP04080 98 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 HOXA5P20719 270 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 CYCSP99999 105 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 TAF9Q16594 264 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 HAGHQ16775 308 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 FAM71E2Q8N5Q1 922 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 PTX4Q96A99 478 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 ABHD14AQ9BUJ0 271 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 NELFAQ9H3P2 528 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 GPR173Q9NS66 373 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 C14orf166Q9Y224 244 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 PIGLQ9Y2B2 252 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 SPRY1O43609 319 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 PATE4P0C8F1 98 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 CDX1P47902 265 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 PRSS54Q6PEW0 395 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 PEG10Q86TG7 708 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 SULF2Q8IWU5 870 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 FAM213BQ8TBF2 198 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 POC1BQ8TC44 478 aa12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 ZNF2Q9BSG1 426 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-210ENST00000541286 IGKV1D-8A0A087WSZ0 117 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 PGA4P0DJD7 388 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 PGA3P0DJD8 388 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 CCL20P78556 96 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 OR8G1Q15617 311 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 PLPPR5Q32ZL2 321 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 WIPI1Q5MNZ9 446 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 FAM180AQ6UWF9 173 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 ABHD17AQ96GS6 310 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 DEFB127Q9H1M4 99 aa12.41□□□□□ -0.42
SFSWAP-210ENST00000541286 MYOZ1Q9NP98 299 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms