RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PEG10Q86TG7 708 aaKnown RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 KRTAP1-3Q8IUG1 177 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 LRRC75A-AS1Q8N1F1 130 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 FAM216BQ8N7L0 139 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 SUMF2Q8NBJ7 301 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CHST4Q8NCG5 386 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 ZNRF1Q8ND25 227 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 OR56B1Q8NGI3 324 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 OR10R2Q8NGX6 335 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 RAB40AQ8WXH6 277 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 FAM168AQ92567 244 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 DYRK2Q92630 601 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 NINJ1Q92982 152 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 S100A16Q96FQ6 103 aaKnown RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 SDSLQ96GA7 329 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 TIMD4Q96H15 378 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 DIRAS2Q96HU8 199 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 ARHGAP5-AS1Q96IT6 56 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CMTM3Q96MX0 182 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 SULT4A1Q9BR01 284 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 FAAP24Q9BTP7 215 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 BPESC1Q9GZL8 116 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CHST6Q9GZX3 395 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 ZMAT3Q9HA38 289 aaKnown RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 MYOZ1Q9NP98 299 aaPredicted RBP7.78□□□□□ -1.16
DDX55-208ENST00000541259 EXTL2Q9UBQ6 330 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 CTSZQ9UBR2 303 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 KCNK7Q9Y2U2 307 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 PEX16Q9Y5Y5 336 aa7.78□□□□□ -1.16
DDX55-208ENST00000541259 UBE2QL1A1L167 161 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A10PA6NDY2 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A18PA6NE21 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A16PA6NEW6 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A20PA6NIJ5 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A8PA6NJQ4 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A7PA6NKC0 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 CEACAM18A8MTB9 384 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A22PA8MWA6 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A12PA8MX19 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A5PA8MXJ8 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A23PA8MXZ1 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 VWC2LB2RUY7 222 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 TMPRSS2O15393 492 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 ADAM20O43506 726 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 XRCC3O43542 346 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 PDCD6O75340 191 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 ZNF737O75373 536 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FSTL3O95633 263 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 CHRM2P08172 466 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A15PP0C7V4 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A13PP0C7W8 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A14PP0C7W9 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FAM90A24PP0C7X0 464 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 FUT3P21217 361 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 EPHA1P21709 976 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 LMO1P25800 156 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 S100A5P33763 92 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 MPV17LQ2QL34 196 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 ZNF260Q3ZCT1 412 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 CDNFQ49AH0 187 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 RAB12Q6IQ22 244 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 CLEC2AQ6UVW9 174 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 C17orf107Q6ZR85 190 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 Q6ZTK2 550 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 LINC00596Q86U02 117 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 CCDC190Q86UF4 302 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 ASCC1Q8N9N2 400 aaKnown RBP7.77□□□□□ -1.17
DDX55-208ENST00000541259 OR4S1Q8NGB4 309 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 PLPPR1Q8TBJ4 325 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 RAB3CQ96E17 227 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 WDFY2Q96P53 400 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 PIMREGQ9BSJ6 248 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 DPCDQ9BVM2 203 aaPredicted RBP7.77□□□□□ -1.17
DDX55-208ENST00000541259 PECRQ9BY49 303 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 SHARPINQ9H0F6 387 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 PPA2Q9H2U2 334 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 ZNF665Q9H7R5 613 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 IFT22Q9H7X7 185 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 SEBOXQ9HB31 216 aaPredicted RBP7.77□□□□□ -1.17
DDX55-208ENST00000541259 DIABLOQ9NR28 239 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 PLEKHJ1Q9NW61 149 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 RCC2Q9P258 522 aaKnown RBP7.77□□□□□ -1.17
DDX55-208ENST00000541259 GLS2Q9UI32 602 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 MRPS7Q9Y2R9 242 aaKnown RBP7.77□□□□□ -1.17
DDX55-208ENST00000541259 NOTCH2Q04721 2471 aa7.77□□□□□ -1.17
DDX55-208ENST00000541259 ZNF469Q96JG9 3925 aaPredicted RBP7.77□□□□□ -1.17
DDX55-208ENST00000541259 MYO9AB2RTY4 2548 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 A0A0G2JMP0 313 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 A0A0X1KG70 313 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 NKX6-3A6NJ46 265 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 SIGLEC5O15389 551 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 HLA-DQB1P01920 261 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 WNT2P09544 360 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 CSF3P09919 207 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
DDX55-208ENST00000541259 NR4A2P43354 598 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 OR3A1P47881 315 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 TAS2R20P59543 309 aa7.76□□□□□ -1.17
DDX55-208ENST00000541259 SEC61A1P61619 476 aaKnown RBP7.76□□□□□ -1.17
DDX55-208ENST00000541259 IL13RA1P78552 427 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms