RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 ARRDC1Q8N5I2 433 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 MRPL30Q8TCC3 161 aaKnown RBP10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF2Q9BSG1 426 aaPredicted RBP10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 RTBDNQ9BSG5 229 aaPredicted RBP10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 DPCDQ9BVM2 203 aaPredicted RBP10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 CHIAQ9BZP6 476 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 MYOZ1Q9NP98 299 aaPredicted RBP10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 DLL4Q9NR61 685 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 TAAR3PQ9P1P4 343 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 METRNQ9UJH8 293 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 SLC33A1O00400 549 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 SPRY3O43610 288 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 NXPH2O95156 264 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 OR2H2O95918 312 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF44P15621 663 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 GLRA1P23415 457 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 KLF3P57682 345 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ARPC4P59998 168 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 UXS1Q8NBZ7 420 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 NEUROG1Q92886 237 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF486Q96H40 463 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 POM121Q96HA1 1249 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 BBC3Q96PG8 261 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 USB1Q9BQ65 265 aaKnown RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF436Q9C0F3 470 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 FXYD6Q9H0Q3 95 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 GPN1Q9HCN4 374 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 Q9N2K0 584 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 C1orf123Q9NWV4 160 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 POLDIP2Q9Y2S7 368 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 KALRNO60229 2985 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 IGKV1-6A0A0C4DH72 117 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 CEACAM18A8MTB9 384 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 DEGS1O15121 323 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 C1QBP02746 253 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 SCTP09683 121 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ANXA3P12429 323 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 AKR1C4P17516 323 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 GZMKP49863 264 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 H2BFSP57053 126 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 IFITM2Q01629 132 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 HERPUD1Q15011 391 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 LAMTOR1Q6IAA8 161 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ADAM5Q6NVV9 412 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 DMRTC2Q8IXT2 367 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 OR2AK2Q8NG84 335 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 ELMOD3Q96FG2 381 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 PLK3Q9H4B4 646 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 CHMP1AQ9HD42 196 aaPredicted RBP10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 OR14J1Q9UGF5 321 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 SLC23A1Q9UHI7 598 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 EDARQ9UNE0 448 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 SPEF1Q9Y4P9 236 aa10.35□□□□□ -0.75
AP003559.1-201ENST00000540906 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 MCRIP1C9JLW8 97 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 H3BUI4 141 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 GOSR2O14653 212 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 NOS1APO75052 506 aaPredicted RBP10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 PTBP3O95758 552 aaKnown RBP10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 HLA-AP01891 365 aaKnown RBP10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 FPR2P25090 351 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 CD200P41217 278 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 ASCL1P50553 236 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 SUPT4H1P63272 117 aaKnown RBP10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 MRPS15P82914 257 aaKnown RBP10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF146Q15072 292 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 LY6G6FQ5SQ64 297 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 ACP7Q6ZNF0 438 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 LINC00596Q86U02 117 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 TGIF2LYQ8IUE0 185 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 C1orf174Q8IYL3 243 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 SPICQ8N5J4 248 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 LINC01560Q8TB33 94 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 LRRC29Q8WV35 223 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 ITLN1Q8WWA0 313 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 MRPL24Q96A35 216 aaKnown RBP10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 MEGF10Q96KG7 1140 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 OR2V2Q96R30 315 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 IFT22Q9H7X7 185 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF286AQ9HBT8 521 aa10.34□□□□□ -0.75
AP003559.1-201ENST00000540906 hCG_1807616A0A1W2PRN6 198 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 CCSO14618 274 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 PSPNO60542 156 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 HAND1O96004 215 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 ACAA1P09110 424 aaPredicted RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 RPS2P15880 293 aaKnown RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 RCC1P18754 421 aaPredicted RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 NFYAP23511 347 aaPredicted RBP10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 PTAFRP25105 342 aa10.33□□□□□ -0.76
AP003559.1-201ENST00000540906 CASP6P55212 293 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms