RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 HLA-DQB1P01920 261 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 HPXP02790 462 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 FCER2P06734 321 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 CD3GP09693 182 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 FAM90A15PP0C7V4 464 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 FAM90A13PP0C7W8 464 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 FAM90A14PP0C7W9 464 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 FAM90A24PP0C7X0 464 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 GSTT2BP0CG30 244 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 IL7P13232 177 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 HIST1H1DP16402 221 aaKnown RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 PRDX2P32119 198 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 CD80P33681 288 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 CFHR2P36980 270 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 PMELP40967 661 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM50BP56557 158 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 DEFA1P59665 94 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 DEFA3P59666 94 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 ERVK11-1P61568 191 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 DGCR2P98153 550 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 RBM39Q14498 530 aaKnown RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 IL13RA2Q14627 380 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF79Q15937 498 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 CARTPTQ16568 116 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 BAK1Q16611 211 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 PNLIPRP3Q17RR3 467 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 MICBQ29980 383 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF181Q2M3W8 571 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 MPV17LQ2QL34 196 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF260Q3ZCT1 412 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 PAN3Q58A45 887 aaKnown RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 NHLRC3Q5JS37 347 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 ACP7Q6ZNF0 438 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 C6orf201Q7Z4U5 140 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 TRAPPC6BQ86SZ2 158 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 PEG10Q86TG7 708 aaKnown RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 LINC00596Q86U02 117 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 DTX2Q86UW9 622 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 OR5T2Q8NGG2 359 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 OR52I2Q8NH67 350 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 Q8TCH9 128 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 ZFAND2BQ8WV99 257 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 NEU4Q8WWR8 484 aaPredicted RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 RDH5Q92781 318 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 GCDHQ92947 438 aaPredicted RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 SEH1LQ96EE3 360 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 FAAP24Q9BTP7 215 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 PECRQ9BY49 303 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 WDR13Q9H1Z4 485 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 SCPEP1Q9HB40 452 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 CHMP1AQ9HD42 196 aaPredicted RBP5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 IFT46Q9NQC8 304 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 C19orf73Q9NVV2 129 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 NLKQ9UBE8 527 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 IL36RNQ9UBH0 155 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 HSF4Q9ULV5 492 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 WIPI2Q9Y4P8 454 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 CACNG2Q9Y698 323 aa5.58□□□□□ -1.52
CLTCL1-206ENST00000540896 LRBAP50851 2863 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 APCP25054 2843 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ABCA4P78363 2273 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PPIAL4EA0A075B759 164 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 TRAV38-1A0A0B4J264 116 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 A0A1W2PQ09 198 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 MEIOCA2RUB1 952 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 MEIS3P1A6NDR6 274 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 OOEPA6NGQ2 149 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 RFPL4AA6NLU0 287 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 OR2AT4A6NND4 320 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CENPXA8MT69 81 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SERPINE3A8MV23 424 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PPIAL4DF5H284 164 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 RFPL4AL1F8VTS6 287 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 LYNX1G3V0Z9 82 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM178BH3BS89 294 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 GABARAPH6UMI1 98 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SULT1C2O00338 296 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 GSTZ1O43708 216 aaPredicted RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 OR2H2O95918 312 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 LHBP01229 141 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 LPLP06858 475 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CSF3P09919 207 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PPIAL4FP0DN26 164 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 LYNX1P0DP58 116 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 DAOP14920 347 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 EGR1P18146 543 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 COL8A2P25067 703 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CHATP28329 748 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 RBMXP38159 391 aaKnown RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CDKN1AP38936 164 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CEBPDP49716 269 aaPredicted RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 AP3S2P59780 193 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 KRTAP10-9P60411 292 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 HOXA4Q00056 320 aaPredicted RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PLAC9Q5JTB6 97 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 FAM201AQ5SY85 155 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 HACD4Q5VWC8 232 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 OLFML2AQ68BL7 652 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SIGIRRQ6IA17 410 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 C11orf71Q6IPW1 123 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms