RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PLXDC2	Q6UX71	529 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HIST2H3A	Q71DI3	136 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C1QL2	Q7Z5L3	287 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LILRB2	Q8N423	598 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ARHGEF39	Q8N4T4	335 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NKAIN3	Q8N8D7	197 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CCDC54	Q8NEL0	328 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR51T1	Q8NGJ9	327 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR5D14	Q8NGL3	314 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	VKORC1	Q9BQB6	163 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM59	Q9BXS4	323 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GPR61	Q9BZJ8	451 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ADAM19	Q9H013	955 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	VSX1	Q9NZR4	365 aa	Predicted RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RALY	Q9UKM9	306 aa	Known RBP	4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	STARD10	Q9Y365	291 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	DMRT1	Q9Y5R6	373 aa		4.93	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CHD9	Q3L8U1	2897 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		A0A1W2PNU3	283 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PLPP3	O14495	311 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	JTB	O76095	146 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CLPS	P04118	112 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PET100	P0DJ07	73 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RPS2	P15880	293 aa	Known RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NDUFB7	P17568	137 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HSD11B1	P28845	292 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CDA	P32320	146 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	THBS4	P35443	961 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RAB5C	P51148	216 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NHLH2	Q02577	135 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	POU3F1	Q03052	451 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IL15RA	Q13261	267 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GGNBP1	Q5YKI7	109 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF441	Q8N8Z8	693 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NAXE	Q8NCW5	288 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR10D3	Q8NH80	312 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FNDC9	Q8TBE3	224 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TOMM40L	Q969M1	308 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PTX4	Q96A99	478 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SLAMF6	Q96DU3	332 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SIGLEC12	Q96PQ1	595 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HIST1H2AA	Q96QV6	131 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SCRT1	Q9BWW7	348 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TREM2	Q9NZC2	230 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	DNAJB11	Q9UBS4	358 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM14DP	A8MWL7	114 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TAAR5	O14804	337 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CDC14B	O60729	498 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LYL1	P12980	280 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HOXA5	P20719	270 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MDK	P21741	143 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FPR2	P25090	351 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	BLVRB	P30043	206 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	APLNR	P35414	380 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CLDN17	P56750	224 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TLE1	Q04724	770 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MZT1	Q08AG7	82 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SRSF6	Q13247	344 aa	Known RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GAMT	Q14353	236 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CHRFAM7A	Q494W8	412 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SOHLH1	Q5JUK2	328 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RIPPLY2	Q5TAB7	128 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IGFL2	Q6UWQ7	119 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SSX9	Q7RTT3	188 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR56B1	Q8NGI3	324 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR1J1	Q8NGS3	322 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C11orf40	Q8WZ69	217 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C14orf144	Q96I85	54 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RBM24	Q9BX46	236 aa	Known RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C19orf12	Q9NSK7	152 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF319	Q9P2F9	582 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MEMO1	Q9Y316	297 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ADAMTS9	Q9P2N4	1935 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C5orf63	A6NC05	138 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM90A27P	A6NNH2	459 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TNFSF11	O14788	317 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CXCL1	P09341	107 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PAX6	P26367	422 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PMP22	Q01453	160 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SURF2	Q15527	256 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HAGH	Q16775	308 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CARD17	Q5XLA6	110 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MRGPRG	Q86SM5	289 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ARRDC1	Q8N5I2	433 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SNRNP40	Q96DI7	357 aa	Known RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SUCNR1	Q9BXA5	334 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM206A	Q9NX38	181 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GAR1	Q9NY12	217 aa	Known RBP	4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZDHHC8	Q9ULC8	765 aa		4.92	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IGLV3-32	A0A0A0MS00	114 aa		4.91	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.91	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF814	B7Z6K7	855 aa		4.91	□□□□□ -1.62

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