RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 NRARPQ7Z6K4 114 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 CIARTQ8N365 385 aaPredicted RBP8.89□□□□□ -0.99
ATL3-204ENST00000540699 TOMM5Q8N4H5 51 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 SCCPDHQ8NBX0 429 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 CHST4Q8NCG5 386 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 Q8TCH9 128 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 ERGIC1Q969X5 290 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 RAB3CQ96E17 227 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 MDFIQ99750 246 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 C7orf50Q9BRJ6 194 aaKnown RBP8.89□□□□□ -0.99
ATL3-204ENST00000540699 PECRQ9BY49 303 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 ZMAT3Q9HA38 289 aaKnown RBP8.89□□□□□ -0.99
ATL3-204ENST00000540699 RHOFQ9HBH0 211 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 GCM1Q9NP62 436 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 RBFOX1Q9NWB1 397 aaKnown RBP8.89□□□□□ -0.99
ATL3-204ENST00000540699 ZNF581Q9P0T4 197 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 HSF4Q9ULV5 492 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 CACNG2Q9Y698 323 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 COL6A5A8TX70 2615 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 ATRQ13535 2644 aa8.89□□□□□ -0.99
ATL3-204ENST00000540699 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
ATL3-204ENST00000540699 TRAPPC2LH3BP13 241 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 H7C1Q1 480 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 GEMIN2O14893 280 aaKnown RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 TPD52L2O43399 206 aaKnown RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 NOS1APO75052 506 aaPredicted RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 RBBP9O75884 186 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 ECDO95905 644 aaPredicted RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 CYB5AP00167 134 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 PGA5P0DJD9 388 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 GABRR1P24046 479 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 INPP1P49441 399 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 LOXL1Q08397 574 aaPredicted RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 MZT1Q08AG7 82 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 IL13RA2Q14627 380 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 TAF9Q16594 264 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 HFEQ30201 348 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 OLFML2AQ68BL7 652 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 DUSP18Q8NEJ0 188 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 SPATA3Q8NHX4 192 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 NUDCD2Q8WVJ2 157 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 DEDD2Q8WXF8 326 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 ZNF488Q96MN9 340 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 NEDD4LQ96PU5 975 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 NRIP2Q9BQI9 281 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 PIMREGQ9BSJ6 248 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 REG4Q9BYZ8 158 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 HES4Q9HCC6 221 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 TMEM106BQ9NUM4 274 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 RCC2Q9P258 522 aaKnown RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 IL36RNQ9UBH0 155 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 ZNF107Q9UII5 783 aaPredicted RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 ST3GAL6Q9Y274 331 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 POLDIP2Q9Y2S7 368 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 FBN1P35555 2871 aaKnown RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 MXRA5Q9NR99 2828 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 ANK3Q12955 4377 aaKnown RBP8.88□□□□□ -0.99
ATL3-204ENST00000540699 MALRD1Q5VYJ5 2156 aa8.88□□□□□ -0.99
ATL3-204ENST00000540699 CUBNO60494 3623 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 MEIS3P1A6NDR6 274 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 SERPINE3A8MV23 424 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 CDIPTO14735 213 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 SMAD7O15105 426 aaKnown RBP8.87□□□□□ -0.99
ATL3-204ENST00000540699 PDCD6O75340 191 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 FSTL3O95633 263 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 CSF1P09603 554 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 GSTT2BP0CG30 244 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 NAT1P18440 290 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 SLC6A1P30531 599 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 PMELP40967 661 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 AP3S2P59780 193 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 ARL6IP1Q15041 203 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 MPV17LQ2QL34 196 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 PLA1AQ53H76 456 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 PRAMEF6Q5VXH4 476 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 MZT2BQ6NZ67 158 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 CCBE1Q6UXH8 406 aaPredicted RBP8.87□□□□□ -0.99
ATL3-204ENST00000540699 WDR82Q6UXN9 313 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 C6orf201Q7Z4U5 140 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 LINC00596Q86U02 117 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 PRIMA1Q86XR5 153 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 Q8IYB0 196 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 BATF2Q8N1L9 274 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 TMEM229BQ8NBD8 167 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 POC1AQ8NBT0 407 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 BPESC1Q9GZL8 116 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 HRASLSQ9HDD0 168 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 DCAF16Q9NXF7 216 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 TAS2R8Q9NYW2 309 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 PPP1R3CQ9UQK1 317 aa8.87□□□□□ -0.99
ATL3-204ENST00000540699 IGHV4-61A0A0C4DH41 118 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 C3orf80F5H4A9 247 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 TMEM178BH3BS89 294 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 CD74P04233 296 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 GRPP07492 148 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 PRKACAP17612 351 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 USF1P22415 310 aaPredicted RBP8.86□□□□□ -0.99
ATL3-204ENST00000540699 RCVRNP35243 200 aa8.86□□□□□ -0.99
ATL3-204ENST00000540699 CFHR2P36980 270 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms