RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 USF3Q68DE3 2245 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 IGHV3-43A0A0B4J1X8 118 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 C1orf196B1AJZ1 125 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 CLDN1O95832 211 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 ACTL6AO96019 429 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 IGHV3-43DP0DP04 118 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 CD37P11049 281 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 TGFBR3Q03167 851 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 TMEM267Q0VDI3 215 aaPredicted RBP8.57□□□□□ -1.04
PHC1-208ENST00000540574 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 ETV3LQ6ZN32 361 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 CCDC54Q8NEL0 328 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 DEFB108BQ8NET1 73 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 TMEM230Q96A57 120 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 FAM173AQ9BQD7 235 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 RTBDNQ9BSG5 229 aaPredicted RBP8.57□□□□□ -1.04
PHC1-208ENST00000540574 KCNIP1Q9NZI2 227 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 DNAJB11Q9UBS4 358 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 ADAMTS9Q9P2N4 1935 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 FIGNL2A6NMB9 653 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 E5RGE8 158 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 CDIPTO14735 213 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 TIMM8AO60220 97 aaPredicted RBP8.57□□□□□ -1.04
PHC1-208ENST00000540574 AGFG2O95081 481 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 PPYP01298 95 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 BMP5P22003 454 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 PJVKQ0ZLH3 352 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 OVCH2Q7RTZ1 564 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 SLC35G3Q8N808 338 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 OR2M7Q8NG81 312 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 RXFP4Q8TDU9 374 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 KIRREL1Q96J84 757 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 SLC26A1Q9H2B4 701 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 UQCC1Q9NVA1 299 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 GTF3C1Q12789 2109 aa8.57□□□□□ -1.04
PHC1-208ENST00000540574 TUBAL3A6NHL2 446 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 UMAD1C9J7I0 102 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 MT-CO3P00414 261 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 KRASP01116 189 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 NPBWR1P48145 328 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 EDDM3BP56851 147 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 RAB5BP61020 215 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 RUNX1Q01196 453 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 DCAF10Q5QP82 559 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 GLRX5Q86SX6 157 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 TBC1D26Q86UD7 250 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 CLRN3Q8NCR9 226 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 OR5C1Q8NGR4 320 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 ERGIC1Q969X5 290 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 PBDC1Q9BVG4 233 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 NMES1Q9C002 83 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 SHARPINQ9H0F6 387 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 WNT5BQ9H1J7 359 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 PLK3Q9H4B4 646 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 TREM2Q9NZC2 230 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 C3orf85A0A1B0GTC6 90 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 SLC22A20A6NK97 555 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 TERTO14746 1132 aaKnown RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 MUC1P15941 1255 aaPredicted RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 ZNF17P17021 662 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 FAM3AP98173 230 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 ZNF816Q0VGE8 651 aaPredicted RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 VAX1Q5SQQ9 334 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 OR1K1Q8NGR3 316 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 OR1J1Q8NGS3 322 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 A0A0U1RQV5 110 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 LNP1A1A4G5 178 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 ZNF724A8MTY0 619 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 LDLRAD4O15165 306 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 LPAR6P43657 344 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 CEBPDP49716 269 aaPredicted RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 ZNF273Q14593 569 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 ZNF239Q16600 458 aaKnown RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 TMEM251Q8N6I4 163 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 ZIC4Q8N9L1 334 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 OR10V1Q8NGI7 309 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 MARS2Q96GW9 593 aaKnown RBP8.56□□□□□ -1.04
PHC1-208ENST00000540574 MMP24Q9Y5R2 645 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 RFNGQ9Y644 331 aa8.56□□□□□ -1.04
PHC1-208ENST00000540574 SRSF10O75494 262 aaKnown RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 PRF1P14222 555 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 RAC2P15153 192 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 HGFACQ04756 655 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 TRA2AQ13595 282 aaKnown RBP eCLIP8.55□□□□□ -1.04
PHC1-208ENST00000540574 CXorf66Q5JRM2 361 aaPredicted RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 CLDN23Q96B33 292 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 FER1L6-AS2Q96M78 137 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 AIFM2Q9BRQ8 373 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 RNF126Q9BV68 326 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 TTTY12Q9BZ98 90 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 SH3BGRL3Q9H299 93 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 GNG13Q9P2W3 67 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 LPAR3Q9UBY5 353 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 ZGRF1Q86YA3 2104 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 ARHGAP21Q5T5U3 1957 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 TRGV5A0A0B4J1U4 118 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms