RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 IGHV3-15A0A0B4J1V0 119 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 A0A1W2PQM1 296 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 CLN5O75503 358 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 DFFBO76075 338 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 IGHV2-70P01814 119 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SLC25A6P12236 298 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 DAOP14920 347 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF32P17041 273 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 UCP1P25874 307 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 S100GP29377 79 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SRD5A2P31213 254 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 CDX1P47902 265 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 IL24Q13007 206 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SPSB3Q6PJ21 355 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 MEX3BQ6ZN04 569 aaKnown RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 OR11L1Q8NGX0 322 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 NAT6Q93015 286 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 CCDC74BQ96LY2 380 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 PRDM14Q9GZV8 571 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 TOLLIPQ9H0E2 274 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 RIMS4Q9H426 269 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 PUS1Q9Y606 427 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SPAG17Q6Q759 2223 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 H3BQ15 152 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 TNFSF11O14788 317 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 F10P00742 488 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 KLK3P07288 261 aaPredicted RBP11.44□□□□□ -0.58
UBE3B-209ENST00000539584 SRP19P09132 144 aaKnown RBP11.44□□□□□ -0.58
UBE3B-209ENST00000539584 FBP1P09467 338 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 CCL3P10147 92 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 EPHA8P29322 1005 aaPredicted RBP11.44□□□□□ -0.58
UBE3B-209ENST00000539584 OR2B8PP59922 312 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 CD81P60033 236 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 CCL7P80098 99 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 PLCXD3Q63HM9 321 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 TBC1D26Q86UD7 250 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 SELENOHQ8IZQ5 122 aaKnown RBP11.44□□□□□ -0.58
UBE3B-209ENST00000539584 IL22RA1Q8N6P7 574 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 TVP23CQ96ET8 276 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 FOXB1Q99853 325 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 NIPSNAP3BQ9BS92 247 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 OR2H1Q9GZK4 316 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 DMRT1Q9Y5R6 373 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 REV3LO60673 3130 aa11.44□□□□□ -0.58
UBE3B-209ENST00000539584 IGSF23A1L1A6 192 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF724A8MTY0 619 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 PPIHO43447 177 aaKnown RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 WNT2P09544 360 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 LBX1P52954 281 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 PSG4Q00888 419 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 MPV17LQ2QL34 196 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 ACSF3Q4G176 576 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 TRIM61Q5EBN2 209 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 NMSQ5H8A3 153 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 DNLZQ5SXM8 178 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 GUSBP11Q6P575 273 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 C1QTNF5Q9BXJ0 243 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 TMEM242Q9NWH2 141 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 RNF150Q9ULK6 438 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 XIRP2A4UGR9 3374 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 HSD17B6O14756 317 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 TUSC2O75896 110 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 OR7C1O76099 320 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 SLC34A2O95436 690 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 NAPSAO96009 420 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 COX6A1P12074 109 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 TAGLN2P37802 199 aaKnown RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 CARD18P57730 90 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 UBE2KP61086 200 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 KIAA0141Q14154 515 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 AAED1Q7RTV5 226 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF611Q8N823 705 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 OR5D13Q8NGL4 314 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 OR5C1Q8NGR4 320 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 RARRES2Q99969 163 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 SRXN1Q9BYN0 137 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 OPA3Q9H6K4 179 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 Q9N2K0 584 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 SLC7A10Q9NS82 523 aa11.43□□□□□ -0.58
UBE3B-209ENST00000539584 MRPS18CQ9Y3D5 142 aaKnown RBP11.43□□□□□ -0.58
UBE3B-209ENST00000539584 ASXL3Q9C0F0 2248 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 LRP5LA4QPB2 252 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 ZNF716A6NP11 495 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 H0Y980 276 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
UBE3B-209ENST00000539584 GPR37O15354 613 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms